Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 9.7e-104 380.2 196 100.0
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 4.9e-71 271.6 197 72.6
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 6.4e-71 271.2 196 71.9
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.7e-68 263.1 201 68.2
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.0e-68 262.3 197 69.0
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 3.0e-68 262.3 198 72.2
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 8.6e-68 260.8 197 68.5
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 8.6e-68 260.8 197 68.5
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 8.6e-68 260.8 199 70.9
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.2e-66 256.9 194 67.5
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.1e-66 256.1 197 67.0
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 2.8e-66 255.8 198 73.2
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 3.6e-66 255.4 198 69.2
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.8e-65 253.1 206 68.9
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 3.4e-64 248.8 201 70.6
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 4.4e-64 248.4 199 66.3
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 5.8e-64 248.1 197 67.0
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 7.5e-64 247.7 208 63.9
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 9.9e-64 247.3 197 70.1
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.3e-63 246.9 199 67.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 2.9e-63 245.7 202 68.8
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 2.9e-63 245.7 193 67.4
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 4.9e-63 245.0 205 64.4
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 6.4e-63 244.6 201 65.2
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 8.3e-63 244.2 210 65.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.1e-62 243.8 200 65.5
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.1e-62 243.8 197 66.0
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.4e-62 243.4 200 68.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.1e-61 239.6 192 67.7
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.7e-61 239.2 191 68.1
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.7e-61 239.2 193 64.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 3.5e-61 238.8 198 65.2
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.3e-60 236.9 196 67.3
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.3e-60 236.9 202 66.8
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.7e-60 236.5 204 62.7
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 2.3e-60 236.1 197 64.0
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.3e-60 236.1 197 64.0
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 2.3e-60 236.1 202 66.8
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 3.9e-60 235.3 204 62.7
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 5.1e-60 235.0 201 63.7
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.1e-60 235.0 202 65.3
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.9e-59 233.0 201 64.7
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.9e-59 233.0 201 65.7
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.9e-59 233.0 197 66.0
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.9e-59 233.0 200 66.5
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 2.5e-59 232.6 200 67.0
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 2.5e-59 232.6 207 61.4
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.3e-59 232.3 202 64.9
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 4.3e-59 231.9 197 63.5
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 9.5e-59 230.7 208 62.5
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 9.5e-59 230.7 202 64.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 4.7e-58 228.4 201 64.7
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 6.2e-58 228.0 188 67.0
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.1e-57 227.3 203 61.6
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 2.0e-56 223.0 193 68.9
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.0e-56 223.0 198 62.6
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 2.0e-56 223.0 175 70.3
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 2.6e-56 222.6 178 68.5
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 4.4e-56 221.9 169 66.9
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 4.4e-56 221.9 213 59.2
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 5.8e-56 221.5 206 61.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 7.6e-56 221.1 206 60.7
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 4.9e-55 218.4 185 64.3
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 8.4e-55 217.6 202 61.9
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 8.4e-55 217.6 197 60.4
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 1.4e-54 216.9 191 60.7
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.4e-54 216.1 194 63.9
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 2.7e-53 212.6 190 64.2
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 7.8e-53 211.1 206 56.3
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 7.8e-53 211.1 141 76.6
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.0e-52 210.7 197 60.9
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.7e-52 209.9 199 56.8
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 1.7e-52 209.9 209 56.0
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.9e-52 208.8 197 57.4
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 3.9e-52 208.8 211 55.5
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-51 207.2 158 65.8
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.1e-51 207.2 191 61.8
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.5e-51 206.8 207 55.6
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.5e-51 206.8 207 55.6
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.5e-51 206.8 207 55.6
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.5e-51 206.8 207 55.6
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 3.3e-51 205.7 194 59.3
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 3.3e-51 205.7 149 67.1
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 4.3e-51 205.3 197 56.9
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 4.3e-51 205.3 207 55.6
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 3.6e-50 202.2 206 53.9
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.4e-49 200.3 149 67.8
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.8e-49 199.9 210 53.8
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.2e-48 197.2 210 53.3
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.2e-48 197.2 193 57.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 3.4e-48 195.7 213 53.5
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 5.8e-48 194.9 206 54.9
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.7e-44 183.3 183 53.6
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.7e-44 183.3 214 52.3
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 5.1e-44 181.8 208 51.9
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 6.6e-44 181.4 207 50.7
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 7.3e-43 177.9 209 50.2
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.3e-42 177.2 203 49.8
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 6.2e-42 174.9 213 47.4
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 3.4e-40 169.1 152 55.3
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 6.7e-36 154.8 148 53.4
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 2.4e-33 146.4 154 49.4
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.1e-27 127.5 92 63.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.1e-26 123.2 167 46.7
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 5.3e-25 118.6 240 36.7
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.0e-17 91.3 117 49.6
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.6e-16 89.7 118 50.8
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 1.3e-15 87.4 161 32.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 8.5e-15 84.7 133 38.3
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 7.2e-14 81.6 140 37.1
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 9.4e-14 81.3 141 30.5
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.1e-13 80.1 182 27.5
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 4.3e-11 72.4 140 30.7
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.7e-10 70.5 102 42.2
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 5.3e-09 65.5 186 28.5
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 6.9e-09 65.1 137 30.7


User provided reference genes

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