Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 5.7e-212 740.7 390 100.0
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.0e-132 476.5 407 67.1
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 5.7e-63 245.7 417 40.5
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 9.1e-61 238.4 417 42.0
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 5.9e-60 235.7 419 38.7
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 1.1e-58 231.5 421 39.7
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 6.3e-54 215.7 442 39.6
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 1.3e-51 208.0 438 37.0
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.5e-50 203.8 414 37.9
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.7e-49 200.3 396 36.9
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 2.3e-48 197.2 419 37.9
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.2e-47 194.9 407 36.6
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 3.4e-47 193.4 406 37.7
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 5.7e-47 192.6 406 37.4
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.7e-47 192.6 405 38.3
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 5.7e-47 192.6 425 36.2
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 3.7e-46 189.9 447 34.9
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 8.3e-46 188.7 422 35.3
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 7.0e-45 185.7 388 34.8
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 2.0e-44 184.1 404 37.6
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 4.5e-44 183.0 406 38.9
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.5e-44 183.0 403 36.7
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.7e-43 181.0 388 34.5
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 5.0e-43 179.5 468 33.5
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 5.6e-42 176.0 413 35.8
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 1.4e-40 171.4 418 34.4
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 3.4e-39 166.8 411 34.8
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 9.8e-39 165.2 401 33.9
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.7e-38 164.5 410 33.9
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 3.7e-38 163.3 398 33.9
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 6.4e-38 162.5 427 33.5
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.8e-37 161.0 408 33.8
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 4.1e-37 159.8 399 34.8
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 7.0e-37 159.1 399 34.3
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.2e-37 158.7 410 33.2
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.2e-36 158.3 422 32.9
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.0e-36 157.5 408 34.3
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.9e-35 153.3 427 31.6
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 8.6e-35 152.1 435 33.1
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.5e-34 150.6 408 32.8
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.3e-34 149.8 409 32.5
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 9.5e-34 148.7 440 33.0
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 8.0e-33 145.6 380 34.2
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 5.2e-32 142.9 405 31.6
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 6.8e-32 142.5 433 31.2
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 6.8e-32 142.5 418 31.1
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 2.6e-31 140.6 418 31.6
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 5.8e-31 139.4 407 30.2
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.2e-30 137.5 257 39.7
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 2.2e-30 137.5 433 34.2
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 2.9e-30 137.1 408 31.6
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 2.9e-30 137.1 420 30.2
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 1.1e-29 135.2 430 34.4
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.1e-29 135.2 422 29.6
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.4e-29 134.8 433 30.3
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.9e-29 134.4 396 29.8
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.1e-29 133.3 396 30.6
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 7.0e-29 132.5 423 31.0
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 9.2e-29 132.1 427 32.3
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.2e-28 131.7 409 29.8
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 1.2e-28 131.7 427 32.3
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.2e-28 131.7 426 28.4
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 4.6e-28 129.8 426 28.2
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 4.6e-28 129.8 404 30.9
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 2.3e-27 127.5 426 30.8
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 3.0e-27 127.1 396 31.6
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.0e-27 126.3 425 27.5
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 7.3e-26 122.5 433 27.3
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 7.3e-26 122.5 416 31.2
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 9.5e-26 122.1 418 30.4
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 2.8e-25 120.6 429 28.7
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 3.6e-25 120.2 408 28.9
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 1.4e-24 118.2 400 29.2
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 1.4e-24 118.2 454 28.2
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 4.0e-24 116.7 427 26.9
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 5.2e-24 116.3 410 30.5
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 1.2e-23 115.2 429 28.7
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.2e-23 115.2 424 28.8
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 1.2e-23 115.2 388 28.4
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 1.2e-23 115.2 424 28.8
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 2.6e-23 114.0 388 27.3
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 2.6e-23 114.0 388 27.3
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.4e-23 113.6 449 29.0
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 3.4e-23 113.6 421 29.0
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 4.4e-23 113.2 437 29.3
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 5.8e-23 112.8 415 28.4
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-22 111.3 384 30.2
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 2.9e-22 110.5 409 28.1
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 3.7e-22 110.2 422 28.7
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 3.7e-22 110.2 432 25.9
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 4.9e-22 109.8 435 28.0
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.1e-21 108.6 427 28.3
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 1.1e-21 108.6 389 28.5
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 9.2e-21 105.5 442 29.9
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 1.2e-20 105.1 401 27.9
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 1.6e-20 104.8 338 28.1
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 2.1e-20 104.4 436 27.5
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 3.5e-20 103.6 398 26.9
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 4.6e-20 103.2 354 28.2
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 1.7e-19 101.3 408 26.2
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.7e-19 101.3 345 30.1
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.7e-19 101.3 345 30.1
AL6G10750 Arabidopsis lyrata HOM05D013727 ORTHO05D003520 2.3e-19 100.9 441 28.1
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 2.3e-19 100.9 399 27.3
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 3.0e-19 100.5 440 26.8
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 6.6e-19 99.4 445 27.0
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 6.6e-19 99.4 382 27.0
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 8.6e-19 99.0 198 35.9
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 8.6e-19 99.0 412 27.2
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 3.3e-18 97.1 415 27.2
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 3.3e-18 97.1 393 27.2
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 4.3e-18 96.7 436 28.2
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 1.2e-17 95.1 233 32.2
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.6e-17 94.7 420 24.3
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 2.1e-17 94.4 135 43.0
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.1e-17 94.4 401 24.4
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 3.6e-17 93.6 242 33.9
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.6e-17 93.6 403 27.0
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.7e-17 93.2 403 27.0
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 1.1e-16 92.0 246 34.1
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 1.1e-16 92.0 397 28.7
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 1.8e-16 91.3 433 28.2
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.8e-16 91.3 399 26.8
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 2.3e-16 90.9 397 27.0
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 2.3e-16 90.9 416 25.2
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 3.1e-16 90.5 384 27.9
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 5.2e-16 89.7 154 40.9
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 6.8e-16 89.4 150 40.0
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-15 88.2 402 25.9
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.0e-15 87.8 428 25.2
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.0e-15 87.8 392 25.8
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 3.4e-15 87.0 410 26.6
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 7.6e-15 85.9 168 36.9
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 7.6e-15 85.9 394 25.9
Sp6g40680 Schrenkiella parvula HOM05D013727 ORTHO05D003520 9.9e-15 85.5 158 39.2
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 2.2e-14 84.3 174 29.9
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.9e-14 84.0 373 27.9
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 2.9e-14 84.0 420 26.9
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.9e-14 84.0 219 32.0
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 1.9e-13 81.3 394 27.4
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 1.9e-13 81.3 420 27.9
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.4e-13 80.9 404 26.2
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 2.4e-13 80.9 412 25.7
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.4e-13 80.9 439 24.8
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 3.2e-13 80.5 404 26.2
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 3.2e-13 80.5 399 26.8
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 5.4e-13 79.7 249 30.1
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 5.4e-13 79.7 409 26.7
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.2e-12 78.6 411 26.5
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.2e-12 78.6 249 30.1
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.6e-12 78.2 400 26.0
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 2.7e-12 77.4 422 27.3
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 3.5e-12 77.0 402 27.4
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 3.5e-12 77.0 171 33.3
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 6.0e-12 76.3 399 26.1
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 6.0e-12 76.3 206 31.6
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 7.8e-12 75.9 232 31.9
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 1.3e-11 75.1 389 28.0
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 1.3e-11 75.1 389 28.0
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 1.3e-11 75.1 156 36.5
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.3e-11 74.3 414 23.7
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 2.3e-11 74.3 192 33.3
arahy.Tifrunner.gnm1.ann1.W084UE Arachis hypogaea HOM05D003726 ORTHO05D003520 3.0e-11 73.9 369 26.3
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 3.9e-11 73.6 394 27.2
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 1.1e-10 72.0 408 24.8
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.1e-10 72.0 424 25.2
AL8G34900 Arabidopsis lyrata HOM05D011448 ORTHO05D003520 1.5e-10 71.6 399 26.1
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.9e-10 71.2 402 24.9
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 2.5e-10 70.9 185 34.1
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 2.5e-10 70.9 446 23.1
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 2.5e-10 70.9 420 24.0
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 9.6e-10 68.9 416 26.7
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 3.6e-09 67.0 246 30.1
PSO384G5133 Papaver somniferum HOM05D003726 ORTHO05D003520 4.7e-09 66.6 320 24.7
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 4.7e-09 66.6 279 27.2
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 3.1e-08 63.9 118 39.8
TAR636G2889 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.0e-07 61.2 207 29.5
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 2.6e-07 60.8 434 23.3
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 5.8e-07 59.7 152 32.9
HPP92_013884 Vanilla planifolia HOM05D003726 ORTHO05D003520 1.7e-06 58.2 404 22.8
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 2.9e-06 57.4 255 29.0
Hund14289 Selenicereus undatus HOM05D029928 ORTHO05D003520 8.4e-06 55.8 363 25.3


User provided reference genes

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