Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.5e-153 546.2 277 100.0
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.0e-115 419.5 237 89.9
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 3.9e-98 362.1 276 72.1
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 4.0e-95 352.1 240 76.7
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 4.0e-95 352.1 237 77.6
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.2e-94 350.5 240 75.4
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 1.5e-94 350.1 239 76.2
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 5.8e-94 348.2 264 71.2
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 5.8e-94 348.2 240 75.0
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 7.6e-94 347.8 245 74.7
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 9.9e-94 347.4 244 73.4
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 2.2e-93 346.3 241 77.2
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.2e-91 340.5 241 75.1
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.2e-91 340.5 241 75.1
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 1.3e-90 337.0 242 72.7
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.7e-90 336.7 240 74.2
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 3.9e-90 335.5 240 72.9
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 5.1e-90 335.1 240 72.9
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.8e-88 329.3 246 71.1
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 3.6e-88 328.9 243 70.4
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 4.8e-88 328.6 240 71.7
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 6.2e-88 328.2 247 70.0
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.1e-87 327.4 236 73.3
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.4e-87 327.0 241 71.8
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.8e-87 326.6 243 71.2
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 3.1e-87 325.9 247 68.4
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 6.9e-87 324.7 243 69.5
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 9.0e-87 324.3 240 69.6
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 2.0e-86 323.2 257 70.8
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 5.8e-86 321.6 240 72.9
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 2.2e-85 319.7 239 69.0
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 3.8e-85 318.9 238 69.3
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 8.4e-85 317.8 244 70.1
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.4e-84 317.0 288 60.1
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.4e-84 317.0 245 68.6
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 4.2e-84 315.5 262 65.6
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 5.4e-84 315.1 244 70.1
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.1e-83 313.2 240 70.0
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 7.9e-83 311.2 242 69.0
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.0e-82 310.8 239 69.5
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.0e-82 310.8 243 68.3
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 3.9e-82 308.9 216 74.1
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 8.7e-82 307.8 239 67.8
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.1e-81 307.4 280 62.9
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.1e-81 307.4 280 62.9
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.5e-81 306.2 270 63.7
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 2.5e-81 306.2 241 66.8
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.6e-81 305.1 279 64.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.6e-81 305.1 279 64.2
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 7.4e-81 304.7 279 63.4
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 7.4e-81 304.7 252 66.3
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 2.1e-80 303.1 236 67.8
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 2.8e-80 302.8 219 70.8
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 3.6e-80 302.4 239 68.2
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 3.6e-80 302.4 239 68.2
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.8e-80 302.0 238 68.9
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 4.8e-80 302.0 246 67.9
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 6.2e-80 301.6 237 66.7
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-79 300.4 236 67.4
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.4e-79 299.7 245 67.3
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 9.0e-79 297.7 241 66.8
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 3.4e-78 295.8 250 64.4
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 3.4e-78 295.8 239 66.9
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 5.8e-78 295.0 265 60.4
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 1.3e-77 293.9 246 65.4
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 1.7e-77 293.5 247 65.2
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 3.8e-77 292.4 255 62.4
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.8e-77 292.4 242 62.4
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 6.4e-77 291.6 245 66.9
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 6.4e-77 291.6 245 66.9
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 1.4e-76 290.4 242 60.7
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 3.2e-76 289.3 243 60.5
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.2e-76 288.9 207 67.6
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 5.5e-76 288.5 245 61.6
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 5.5e-76 288.5 243 60.5
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 7.1e-76 288.1 245 60.4
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 7.1e-76 288.1 242 61.6
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.0e-74 284.3 243 63.8
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.3e-74 283.9 247 62.3
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 2.3e-74 283.1 242 63.6
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 2.3e-74 283.1 293 56.7
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 3.9e-74 282.3 253 60.1
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 8.7e-74 281.2 160 83.1
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 2.5e-73 279.6 239 64.4
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 3.3e-73 279.3 257 59.9
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 7.4e-73 278.1 248 61.3
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.3e-72 277.3 247 61.9
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.4e-71 273.9 244 60.2
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.4e-71 273.1 245 58.0
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 2.4e-71 273.1 164 81.1
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.5e-70 270.4 210 65.2
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.0e-69 267.7 245 59.6
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.7e-69 266.9 248 58.9
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.7e-69 266.9 248 58.9
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 4.9e-69 265.4 255 57.3
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.1e-68 264.2 239 62.8
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 1.1e-65 254.2 236 60.6
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 2.0e-62 243.4 168 70.8
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 2.0e-62 243.4 162 75.3
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 1.5e-57 227.3 188 58.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 6.3e-56 221.9 230 50.0
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 8.2e-56 221.5 190 65.8
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.2e-54 217.6 110 91.8
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.6e-54 216.5 245 53.5
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 4.5e-54 215.7 182 58.2
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 1.9e-52 210.3 129 76.7
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 9.4e-52 208.0 189 63.0
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 1.4e-50 204.1 185 62.7
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 2.2e-48 196.8 131 71.8
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 6.3e-40 168.7 195 53.3
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 2.4e-39 166.8 90 83.3
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.0e-38 163.7 151 62.3
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 3.3e-33 146.4 109 62.4
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 7.7e-30 135.2 93 65.6
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 8.0e-27 125.2 157 45.2
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.5e-25 120.9 114 59.6
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 5.0e-21 105.9 56 89.3
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 2.5e-20 103.6 82 61.0
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 2.0e-17 94.0 49 81.6
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 4.4e-17 92.8 56 76.8
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.3e-13 81.3 65 58.5
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 4.3e-12 76.3 38 78.9
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-09 65.1 96 45.8
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 2.9e-08 63.5 34 85.3
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 60.5 80 47.5


User provided reference genes

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