Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1612 Tripterygium wilfordii HOM05D006910 ORTHO05D008937 3.4e-115 419.1 347 100.0
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 4.3e-46 189.5 310 47.7
Cpa.g.sc59.4 Carica papaya HOM05D006910 ORTHO05D008937 6.2e-45 185.7 320 45.6
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 2.6e-43 180.3 327 42.8
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 3.4e-43 179.9 326 45.7
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 7.6e-43 178.7 315 42.5
Potri.010G065400 Populus trichocarpa HOM05D006910 ORTHO05D008937 1.3e-42 177.9 302 44.4
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 2.2e-42 177.2 275 50.9
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 3.8e-42 176.4 310 39.0
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 4.9e-42 176.0 322 46.3
Thecc.04G265400 Theobroma cacao HOM05D006910 ORTHO05D008937 2.5e-41 173.7 322 47.5
COL.COLO4_15971 Corchorus olitorius HOM05D006910 ORTHO05D008937 3.2e-41 173.3 294 48.6
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.6e-40 171.0 307 46.9
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 2.7e-40 170.2 326 45.1
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 3.9e-39 166.4 318 44.3
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 5.7e-38 162.5 306 42.5
Glyma.20G199800 Glycine max HOM05D006910 ORTHO05D008937 7.4e-38 162.2 309 43.7
Potri.008G172200 Populus trichocarpa HOM05D006910 ORTHO05D008937 1.4e-36 157.9 291 44.0
Nitab4.5_0006344g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 3.1e-36 156.8 331 33.2
Nitab4.5_0000355g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 4.1e-36 156.4 335 34.0
MD16G1226800 Malus domestica HOM05D006910 ORTHO05D008937 1.5e-35 154.5 295 45.4
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 5.8e-35 152.5 194 45.4
Glyma.10G190700 Glycine max HOM05D006910 ORTHO05D008937 1.0e-34 151.8 304 42.8
MD13G1221900 Malus domestica HOM05D006910 ORTHO05D008937 1.3e-34 151.4 293 45.4
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 3.8e-34 149.8 304 44.1
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 3.8e-34 149.8 322 47.8
Phvul.011G133545 Phaseolus vulgaris HOM05D006910 ORTHO05D008937 5.0e-34 149.4 314 34.1
PGR031G1888 Punica granatum HOM05D006910 ORTHO05D008937 5.5e-33 146.0 309 43.4
PGSC0003DMG400001551 Solanum tuberosum HOM05D006910 ORTHO05D008937 9.3e-33 145.2 327 33.0
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.6e-32 144.4 320 43.1
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 1.6e-32 144.4 221 41.2
Sopen09g033910 Solanum pennellii HOM05D006910 ORTHO05D008937 1.6e-32 144.4 327 41.6
Solyc09g090930.3 Solanum lycopersicum HOM05D006910 ORTHO05D008937 3.0e-31 140.2 327 40.7
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 3.9e-31 139.8 309 39.2
Lj5g0027299 Lotus japonicus HOM05D006910 ORTHO05D008937 5.1e-31 139.4 322 41.0
Sc13g0003110 Simmondsia chinensis HOM05D006910 ORTHO05D008937 5.1e-31 139.4 256 44.1
Hund20492 Selenicereus undatus HOM05D006910 ORTHO05D008937 6.7e-31 139.0 300 43.0
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 8.7e-31 138.7 265 44.9
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.5e-30 137.9 332 33.4
PGR031G1691 Punica granatum HOM05D006910 ORTHO05D008937 1.5e-30 137.9 302 42.7
VMungo0720G1174 Vigna mungo HOM05D006910 ORTHO05D008937 2.5e-30 137.1 194 42.3
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 4.3e-30 136.3 317 44.2
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 5.7e-30 136.0 289 43.3
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 5.7e-30 136.0 317 44.8
RcHm_v2.0_Chr4g0395481 Rosa chinensis HOM05D006910 ORTHO05D008937 1.3e-29 134.8 300 41.3
EL10Ac3g06675 Beta vulgaris HOM05D006910 ORTHO05D008937 2.8e-29 133.7 311 39.2
FAN17G1396 Fragaria x ananassa HOM05D006910 ORTHO05D008937 2.8e-29 133.7 299 42.1
FvH4_4g04670 Fragaria vesca HOM05D006910 ORTHO05D008937 4.8e-29 132.9 299 42.1
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 6.3e-29 132.5 328 46.0
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 1.8e-28 131.0 336 39.3
FAN12G3461 Fragaria x ananassa HOM05D006910 ORTHO05D008937 3.1e-28 130.2 309 32.0
CAN.G638.37 Capsicum annuum HOM05D006910 ORTHO05D008937 4.1e-28 129.8 331 38.4
FAN22G1859 Fragaria x ananassa HOM05D006910 ORTHO05D008937 4.1e-28 129.8 294 41.8
CAN.G524.13 Capsicum annuum HOM05D006910 ORTHO05D008937 5.3e-28 129.4 326 38.3
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.5e-27 127.9 187 44.9
AUR62015241 Chenopodium quinoa HOM05D006910 ORTHO05D008937 5.0e-26 122.9 304 36.5
ClCG05G003960 Citrullus lanatus HOM05D006910 ORTHO05D008937 1.4e-25 121.3 296 34.1
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 5.5e-25 119.4 329 38.3
PGSC0003DMG400013458 Solanum tuberosum HOM05D006910 ORTHO05D008937 5.5e-25 119.4 340 37.4
TPR.G18548 Trifolium pratense HOM05D006910 ORTHO05D008937 2.7e-24 117.1 309 45.3
Psat6g131280 Pisum sativum HOM05D006910 ORTHO05D008937 3.6e-24 116.7 307 38.1
MSTRG.4175 Avicennia marina HOM05D006910 ORTHO05D008937 4.6e-24 116.3 342 34.5
Ca_09799_v3 Cicer arietinum L. HOM05D006910 ORTHO05D008937 6.1e-24 115.9 301 45.5
Peaxi162Scf01044g00225 Petunia axillaris HOM05D006910 ORTHO05D008937 6.1e-24 115.9 327 35.8
Sopen03g001720 Solanum pennellii HOM05D006910 ORTHO05D008937 6.1e-24 115.9 327 37.6
Medtr1g073230 Medicago truncatula HOM05D006910 ORTHO05D008937 3.0e-23 113.6 303 37.0
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 1.5e-22 111.3 320 39.7
CsaV3_3G011640 Cucumis sativus L. HOM05D006910 ORTHO05D008937 5.7e-22 109.4 295 33.2
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 3.7e-21 106.7 331 36.3
arahy.Tifrunner.gnm1.ann1.YFRU1Z Arachis hypogaea HOM05D006910 ORTHO05D008937 1.1e-20 105.1 321 37.4
Eucgr.H00126 Eucalyptus grandis HOM05D006910 ORTHO05D008937 1.1e-20 105.1 222 42.8
MELO3C006372.2 Cucumis melo HOM05D006910 ORTHO05D008937 1.2e-19 101.7 323 36.8
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 1.5e-19 101.3 306 46.7
Thhalv10008199m.g Eutrema salsugineum HOM05D006910 ORTHO05D008937 2.0e-19 100.9 212 33.5
arahy.Tifrunner.gnm1.ann1.DX8ZNF Arachis hypogaea HOM05D006910 ORTHO05D008937 3.4e-19 100.1 318 35.8
Ah.13g074730 Amaranthus hybridus HOM05D006910 ORTHO05D008937 7.7e-19 99.0 289 37.0
Nitab4.5_0000592g0430 Nicotiana tabacum HOM05D006910 ORTHO05D008937 1.3e-18 98.2 198 37.4
BraA10t42564Z Brassica rapa HOM05D006910 ORTHO05D008937 1.7e-18 97.8 193 35.2
Aa31LG1G20340 Aethionema arabicum HOM05D006910 ORTHO05D008937 2.9e-18 97.1 198 35.4
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 2.9e-18 97.1 168 40.5
A10p02950 Brassica napus HOM05D006910 ORTHO05D008937 3.8e-18 96.7 191 34.6
AT1G04530 Arabidopsis thaliana HOM05D006910 ORTHO05D008937 2.5e-17 94.0 200 35.0
THA.LOC104801064 Tarenaya hassleriana HOM05D006910 ORTHO05D008937 3.2e-17 93.6 250 29.6
AL1G14180 Arabidopsis lyrata HOM05D006910 ORTHO05D008937 1.6e-16 91.3 202 34.7
Sed0015418 Sechium edule HOM05D006910 ORTHO05D008937 4.7e-16 89.7 288 37.5
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 6.1e-16 89.4 165 37.6
Lalb_Chr06g0169541 Lupinus albus HOM05D006910 ORTHO05D008937 1.0e-15 88.6 200 34.5
Carub.0001s0374 Capsella rubella HOM05D006910 ORTHO05D008937 1.4e-15 88.2 194 34.5
Migut.G00574 Erythranthe guttata HOM05D006910 ORTHO05D008937 1.4e-15 88.2 322 36.3
BolC5t29051H Brassica oleracea HOM05D006910 ORTHO05D008937 2.3e-15 87.4 200 33.0
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 3.0e-15 87.0 170 39.4
C05p02700 Brassica napus HOM05D006910 ORTHO05D008937 3.9e-15 86.7 199 33.7
Sp1g03360 Schrenkiella parvula HOM05D006910 ORTHO05D008937 8.8e-15 85.5 195 33.3
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 1.1e-14 85.1 291 45.0
CARHR003870 Cardamine hirsuta HOM05D006910 ORTHO05D008937 2.0e-14 84.3 206 33.0
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 3.3e-14 83.6 163 39.3
SGA_v2.0_scaffold67G22680 Striga asiatica HOM05D006910 ORTHO05D008937 4.4e-14 83.2 325 31.7
Nitab4.5_0002210g0060 Nicotiana tabacum HOM05D006910 ORTHO05D008937 5.7e-14 82.8 310 26.5
Lsat_1_v5_gn_6_66101 Lactuca sativa HOM05D006910 ORTHO05D008937 1.3e-13 81.6 151 39.7
THA.LOC104826095 Tarenaya hassleriana HOM05D006910 ORTHO05D008937 1.3e-13 81.6 265 29.4
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 4.8e-13 79.7 155 36.1
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 8.2e-13 79.0 164 37.2
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 8.2e-13 79.0 294 44.9
SalBow2G0872 Salvia bowleyana HOM05D006910 ORTHO05D008937 1.2e-11 75.1 299 25.4
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 2.9e-10 70.5 178 33.7
C08p52150 Brassica napus HOM05D006910 ORTHO05D008937 2.9e-10 70.5 120 37.5
Lsat_1_v5_gn_1_75580 Lactuca sativa HOM05D006910 ORTHO05D008937 8.5e-10 68.9 222 38.7
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 8.5e-10 68.9 154 38.3
ECA248G3309 Erigeron canadensis HOM05D006910 ORTHO05D008937 1.5e-09 68.2 153 47.1
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.9e-09 67.8 166 34.9
BolC8t52749H Brassica oleracea HOM05D006910 ORTHO05D008937 2.5e-09 67.4 121 34.7
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 4.2e-09 66.6 100 41.0
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 6.1e-08 62.8 164 34.8
HanXRQChr01g0023021 Helianthus annuus HOM05D006910 ORTHO05D008937 1.5e-06 58.2 157 44.6


User provided reference genes

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