Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 9.8e-124 446.8 227 100.0
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.1e-87 327.0 202 81.7
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 3.3e-87 325.5 202 81.2
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 4.9e-83 311.6 203 77.3
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 8.4e-83 310.8 201 73.1
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 1.4e-82 310.1 201 73.1
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 2.4e-82 309.3 202 76.7
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 4.2e-82 308.5 202 76.2
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 7.1e-82 307.8 202 77.2
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.2e-81 307.0 201 72.1
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 1.6e-81 306.6 202 77.2
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 2.1e-81 306.2 198 76.8
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 2.1e-81 306.2 200 76.0
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 2.7e-81 305.8 201 75.6
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 2.7e-81 305.8 198 77.3
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 3.5e-81 305.4 198 77.3
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 6.0e-81 304.7 202 76.2
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 6.0e-81 304.7 202 75.2
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 7.9e-81 304.3 202 75.2
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 1.3e-80 303.5 201 76.1
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 1.3e-80 303.5 198 77.3
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 2.3e-80 302.8 198 77.3
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 3.9e-80 302.0 202 74.8
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.1e-79 300.4 202 74.3
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 1.9e-79 299.7 198 76.3
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 2.5e-79 299.3 202 75.2
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 3.3e-79 298.9 198 75.8
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.7e-78 295.4 202 75.7
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 3.7e-78 295.4 198 74.7
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 4.8e-78 295.0 198 74.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 4.8e-78 295.0 202 73.8
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 6.2e-78 294.7 198 75.8
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 8.1e-78 294.3 202 73.8
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 1.1e-77 293.9 202 73.3
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 1.4e-77 293.5 198 74.7
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 1.8e-77 293.1 199 71.9
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.3e-77 291.6 202 74.8
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 6.9e-77 291.2 198 73.2
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 1.2e-76 290.4 199 72.9
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 1.5e-76 290.0 199 72.9
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 2.0e-76 289.7 202 69.3
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 2.0e-76 289.7 202 69.3
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 2.6e-76 289.3 202 68.8
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 2.6e-76 289.3 199 72.4
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 2.6e-76 289.3 202 68.8
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 2.6e-76 289.3 202 70.3
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 3.4e-76 288.9 198 70.7
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 4.5e-76 288.5 202 68.8
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 4.5e-76 288.5 199 72.4
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 7.6e-76 287.7 202 68.8
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.0e-75 287.3 198 74.7
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.7e-75 286.6 202 70.3
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 2.2e-75 286.2 202 68.8
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 2.2e-75 286.2 198 74.2
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 3.8e-75 285.4 195 75.4
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.1e-74 283.9 202 71.3
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 1.9e-74 283.1 193 72.0
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 1.9e-74 283.1 202 68.3
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.9e-74 283.1 201 73.6
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.9e-74 283.1 202 69.8
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.2e-74 282.3 199 71.9
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 7.1e-74 281.2 198 73.2
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 7.1e-74 281.2 192 74.5
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 7.1e-74 281.2 198 71.2
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 9.3e-74 280.8 198 71.2
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 1.2e-73 280.4 198 69.2
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 2.1e-73 279.6 202 68.3
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 2.1e-73 279.6 201 73.6
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 3.5e-73 278.9 195 72.3
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 7.9e-73 277.7 205 67.3
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 7.9e-73 277.7 201 68.7
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 1.0e-72 277.3 202 69.3
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.0e-72 277.3 201 71.1
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.3e-72 276.9 198 73.2
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.3e-72 276.9 198 72.2
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 2.3e-72 276.2 198 70.7
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 5.1e-72 275.0 204 71.1
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 8.7e-72 274.2 197 70.1
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.5e-71 273.5 198 69.2
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 1.9e-71 273.1 198 69.2
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.3e-71 272.3 199 72.9
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 1.6e-70 270.0 195 68.7
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 1.6e-70 270.0 195 69.2
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 2.8e-70 269.2 199 71.4
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 3.7e-70 268.9 188 71.8
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 4.8e-70 268.5 198 69.2
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 8.2e-70 267.7 180 75.0
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.1e-69 267.3 179 74.3
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 1.4e-69 266.9 191 69.6
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 1.4e-69 266.9 194 69.1
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 3.1e-69 265.8 198 68.7
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 5.3e-69 265.0 198 68.7
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.2e-68 263.8 208 65.4
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 2.0e-68 263.1 198 68.7
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 2.0e-68 263.1 196 67.3
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 4.5e-68 261.9 196 67.3
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 1.7e-67 260.0 199 66.3
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 6.5e-67 258.1 199 65.3
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 8.4e-67 257.7 174 73.6
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 8.4e-67 257.7 202 67.3
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.1e-66 257.3 184 68.5
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 1.1e-66 257.3 201 65.7
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 1.4e-66 256.9 198 67.7
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 1.9e-66 256.5 198 67.2
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.2e-66 255.8 199 66.3
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 3.2e-66 255.8 195 66.2
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 9.3e-66 254.2 181 70.2
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 1.2e-65 253.8 204 66.7
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 1.2e-65 253.8 198 64.6
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 1.3e-64 250.4 196 65.8
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 2.3e-64 249.6 200 64.5
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 7.4e-63 244.6 177 67.8
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.6e-62 243.4 332 46.7
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 6.3e-62 241.5 185 63.8
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.5e-60 236.9 217 59.0
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 2.6e-60 236.1 209 57.4
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 1.0e-59 234.2 168 74.4
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 3.6e-57 225.7 220 59.1
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 6.1e-57 224.9 240 54.6
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 3.3e-55 219.2 253 50.2
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 1.7e-51 206.8 167 65.3
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 7.2e-50 201.4 233 52.4
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 3.3e-47 192.6 193 50.3
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 1.1e-45 187.6 191 49.2
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 1.3e-43 180.6 223 48.4
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 1.5e-42 177.2 193 52.3
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 1.6e-41 173.7 128 70.3
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 1.4e-40 170.6 112 75.0
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 9.7e-39 164.5 112 69.6
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 4.1e-37 159.1 191 45.0
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.0e-36 156.8 177 45.8
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 2.0e-36 156.8 119 65.5
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.7e-35 153.7 112 66.1
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 5.0e-35 152.1 118 67.8
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 3.0e-32 142.9 159 47.8
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 4.0e-32 142.5 206 41.7
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.5e-31 140.6 94 66.0
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 4.1e-29 132.5 87 71.3
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.0e-27 127.9 103 60.2
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.8e-27 125.9 81 72.8
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.9e-26 123.6 81 72.8
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 4.2e-26 122.5 89 71.9
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 1.0e-24 117.9 208 36.1
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.4e-24 117.5 81 67.9
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 4.4e-23 112.5 128 50.0
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 4.1e-21 105.9 132 49.2
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 1.2e-20 104.4 104 56.7
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.6e-20 104.0 94 59.6
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 3.5e-20 102.8 102 57.8
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.3e-19 100.9 68 70.6
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.5e-18 97.4 69 71.0
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 2.5e-18 96.7 115 47.8
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 4.7e-17 92.4 156 37.8
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 8.0e-17 91.7 70 61.4
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 1.5e-15 87.4 75 58.7
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 9.8e-15 84.7 192 31.2
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 3.5e-12 76.3 115 42.6
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 5.9e-12 75.5 49 69.4
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 3.9e-11 72.8 102 41.2
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 8.6e-11 71.6 45 73.3
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 3.1e-08 63.2 45 64.4
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 6.8e-08 62.0 70 44.3
RcHm_v2.0_Chr1g0352451 Rosa chinensis HOM05D004366 ORTHO05D005058 4.4e-07 59.3 36 75.0
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 7.5e-07 58.5 36 75.0


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