Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1251 Tripterygium wilfordii HOM05D006485 ORTHO05D006108 1.1e-105 387.9 459 100.0
Potri.015G060600 Populus trichocarpa HOM05D006485 ORTHO05D006108 9.5e-17 92.4 127 43.3
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.1e-15 89.0 128 49.2
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 8.9e-15 85.9 128 48.4
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 8.9e-15 85.9 128 48.4
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 2.6e-14 84.3 126 46.0
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 7.5e-14 82.8 123 44.7
TAR623G0376 Trochodendron aralioides HOM05D006485 ORTHO05D006108 7.5e-14 82.8 98 46.9
PSO339G3752 Papaver somniferum HOM05D006485 ORTHO05D006108 2.2e-13 81.3 120 43.3
Eucgr.A01582 Eucalyptus grandis HOM05D006485 ORTHO05D006108 2.9e-13 80.9 108 46.3
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 6.4e-13 79.7 129 44.2
A05p09230 Brassica napus HOM05D006485 ORTHO05D006108 8.3e-13 79.3 79 58.2
PSO063G6051 Papaver somniferum HOM05D006485 ORTHO05D006108 8.3e-13 79.3 125 44.0
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.4e-12 78.6 121 44.6
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 2.4e-12 77.8 128 43.0
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 3.2e-12 77.4 89 49.4
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 4.1e-12 77.0 90 47.8
RcHm_v2.0_Chr3g0471651 Rosa chinensis HOM05D006485 ORTHO05D006108 5.4e-12 76.6 143 39.9
Ciclev10013512m.g Citrus clementina HOM05D006485 ORTHO05D006108 9.2e-12 75.9 158 44.3
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 9.2e-12 75.9 82 50.0
Aqoxy1G01006 Aquilegia oxysepala HOM05D006485 ORTHO05D006108 1.6e-11 75.1 172 36.6
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 2.1e-11 74.7 84 48.8
THA.LOC104827498 Tarenaya hassleriana HOM05D006485 ORTHO05D006108 4.6e-11 73.6 150 48.0
CSS0031113 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 1.0e-10 72.4 168 32.7
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 1.0e-10 72.4 130 49.2
Thhalv10010945m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 3.0e-10 70.9 87 50.6
Haze_19505 Corylus avellana HOM05D006485 ORTHO05D006108 3.9e-10 70.5 159 33.3
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 5.0e-10 70.1 97 44.3
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 8.6e-10 69.3 173 31.2
AL4G32820 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 1.1e-09 68.9 83 47.0
Manes.08G018000 Manihot esculenta HOM05D006485 ORTHO05D006108 2.5e-09 67.8 105 42.9
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 3.3e-09 67.4 121 36.4
AUR62037914 Chenopodium quinoa HOM05D006485 ORTHO05D006108 5.6e-09 66.6 117 40.2
Migut.L01738 Erythranthe guttata HOM05D013674 ORTHO05D006108 9.5e-09 65.9 136 36.8
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.2e-08 65.5 88 43.2
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 1.6e-08 65.1 128 43.0
Hund12313 Selenicereus undatus HOM05D006485 ORTHO05D006108 1.6e-08 65.1 127 39.4
Cfa016502 Carpinus fangiana HOM05D006485 ORTHO05D006108 2.1e-08 64.7 160 40.0
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 2.1e-08 64.7 122 36.9
AUR62040165 Chenopodium quinoa HOM05D006485 ORTHO05D006108 6.2e-08 63.2 113 39.8
EL10Ac7g16753 Beta vulgaris HOM05D006485 ORTHO05D006108 8.1e-08 62.8 164 38.4
COL.COLO4_22277 Corchorus olitorius HOM05D006485 ORTHO05D006108 8.1e-08 62.8 53 56.6
Prupe.7G121500 Prunus persica HOM05D006485 ORTHO05D006108 8.1e-08 62.8 89 44.9
Sc02g0001270 Simmondsia chinensis HOM05D006485 ORTHO05D006108 8.1e-08 62.8 156 33.3
A04p06430 Brassica napus HOM05D006485 ORTHO05D006108 1.1e-07 62.4 88 45.5
BraA04t16347Z Brassica rapa HOM05D006485 ORTHO05D006108 1.1e-07 62.4 88 45.5
CARHR162930 Cardamine hirsuta HOM05D006485 ORTHO05D006108 1.1e-07 62.4 103 45.6
Nitab4.5_0006314g0010 Nicotiana tabacum HOM05D006485 ORTHO05D006108 1.1e-07 62.4 122 36.1
MELO3C009418.2 Cucumis melo HOM05D006485 ORTHO05D006108 1.4e-07 62.0 52 53.8
GSVIVG01033739001 Vitis vinifera HOM05D006485 ORTHO05D006108 1.4e-07 62.0 73 52.1
Cfa016504 Carpinus fangiana HOM05D006485 ORTHO05D006108 1.8e-07 61.6 59 50.8
Lj3C1005T3 Lonicera japonica HOM05D011389 ORTHO05D006108 3.1e-07 60.8 108 39.8
Sp5g09280 Schrenkiella parvula HOM05D006485 ORTHO05D006108 4.0e-07 60.5 85 43.5
BcaC02g09194 Brassica carinata HOM05D006485 ORTHO05D006108 5.2e-07 60.1 88 43.2
BolC4t25563H Brassica oleracea HOM05D006485 ORTHO05D006108 5.2e-07 60.1 88 43.2
QL07p041110 Quercus lobata HOM05D006485 ORTHO05D006108 6.8e-07 59.7 147 32.0
Carub.0005s1954 Capsella rubella HOM05D006485 ORTHO05D006108 8.9e-07 59.3 83 45.8
Lalb_Chr06g0172031 Lupinus albus HOM05D013674 ORTHO05D006108 8.9e-07 59.3 62 53.2
Ah.15g091240 Amaranthus hybridus HOM05D011389 ORTHO05D006108 1.2e-06 58.9 126 34.1
C04p39920 Brassica napus HOM05D006485 ORTHO05D006108 1.2e-06 58.9 84 45.2
Nn2g13931 Nelumbo nucifera HOM05D006485 ORTHO05D006108 1.5e-06 58.5 183 31.1
Glyma.10G064400 Glycine max HOM05D013674 ORTHO05D006108 2.0e-06 58.2 57 50.9
BcaB02g08540 Brassica carinata HOM05D006485 ORTHO05D006108 2.6e-06 57.8 88 42.0
Gohir.D04G106200 Gossypium hirsutum HOM05D006485 ORTHO05D006108 3.4e-06 57.4 75 50.7
Gorai.009G410100 Gossypium raimondii HOM05D006485 ORTHO05D006108 3.4e-06 57.4 75 50.7
Sed0018771 Sechium edule HOM05D006485 ORTHO05D006108 3.4e-06 57.4 59 55.9
CsaV3_3G036640 Cucumis sativus L. HOM05D006485 ORTHO05D006108 4.4e-06 57.0 49 55.1
BcaB06g28951 Brassica carinata HOM05D006485 ORTHO05D006108 5.8e-06 56.6 76 44.7
Ca_11604_v3 Cicer arietinum L. HOM05D013674 ORTHO05D006108 5.8e-06 56.6 72 51.4
Ca_12340_v3 Cicer arietinum L. HOM05D013674 ORTHO05D006108 5.8e-06 56.6 72 51.4
AL5G33870 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 7.5e-06 56.2 81 43.2
CARHR130920 Cardamine hirsuta HOM05D006485 ORTHO05D006108 7.5e-06 56.2 76 47.4
Glyma.13G149000 Glycine max HOM05D013674 ORTHO05D006108 7.5e-06 56.2 41 58.5
SalBow5G2944 Salvia bowleyana HOM05D006485 ORTHO05D006108 7.5e-06 56.2 117 34.2
Atru.chr8.1686 Acer truncatum HOM05D006485 ORTHO05D006108 9.9e-06 55.8 75 49.3
A04p28050 Brassica napus HOM05D006485 ORTHO05D006108 9.9e-06 55.8 76 44.7
C04p65460 Brassica napus HOM05D006485 ORTHO05D006108 9.9e-06 55.8 76 44.7


User provided reference genes

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