Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 0.0e+00 2253.0 1123 100.0
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 0.0e+00 1590.1 1125 70.9
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 0.0e+00 1577.0 1140 69.3
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 0.0e+00 1564.3 1125 69.2
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 0.0e+00 1546.6 1115 69.6
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 0.0e+00 1531.5 1125 68.9
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 0.0e+00 1513.8 1125 66.5
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 0.0e+00 1497.3 1129 67.1
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 0.0e+00 1490.3 1122 66.4
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 0.0e+00 1475.3 1150 67.2
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1471.8 1132 66.8
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 0.0e+00 1471.4 1135 66.4
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1471.1 1132 67.0
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1469.9 1132 66.8
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1467.2 1132 66.5
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 0.0e+00 1465.7 1143 66.3
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 0.0e+00 1462.2 1132 66.7
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1461.8 1134 66.4
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1456.4 1132 66.5
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1454.1 1132 66.5
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1444.5 1125 64.8
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 0.0e+00 1441.8 1134 65.7
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1439.1 1159 65.0
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 0.0e+00 1438.7 1125 64.6
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1434.1 1125 64.5
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 0.0e+00 1431.0 1129 65.5
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1416.4 1144 64.7
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 0.0e+00 1407.5 1139 64.2
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1376.7 1137 61.7
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 0.0e+00 1365.9 1140 62.5
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 0.0e+00 1365.1 1138 62.4
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 0.0e+00 1364.4 1133 61.8
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 0.0e+00 1360.5 1168 60.4
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 0.0e+00 1359.0 1134 62.2
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 0.0e+00 1357.8 1140 62.0
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 0.0e+00 1355.9 1118 62.4
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 0.0e+00 1354.3 1129 62.1
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 0.0e+00 1354.0 1128 61.7
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 0.0e+00 1339.7 1124 61.8
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 0.0e+00 1333.9 1129 61.0
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 0.0e+00 1333.2 1134 62.2
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1326.2 1125 62.6
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1314.7 1135 58.7
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1313.1 1136 58.4
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 0.0e+00 1307.7 1125 62.2
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1307.0 1128 61.8
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 0.0e+00 1299.6 1125 60.7
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 0.0e+00 1295.8 1132 60.2
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 0.0e+00 1291.6 1124 61.0
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 0.0e+00 1281.5 1131 60.2
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 0.0e+00 1273.5 1137 58.0
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 0.0e+00 1271.1 1140 57.9
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 0.0e+00 1267.7 1089 61.4
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 0.0e+00 1267.3 1137 57.8
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1265.0 1136 58.9
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 0.0e+00 1264.6 1140 57.6
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 0.0e+00 1262.3 1137 58.3
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 0.0e+00 1260.7 1142 57.6
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 0.0e+00 1256.9 1136 57.3
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1250.7 1136 58.5
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 0.0e+00 1247.3 1133 57.9
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 0.0e+00 1244.2 1128 57.4
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 0.0e+00 1244.2 1144 56.8
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 0.0e+00 1242.6 1143 56.7
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 0.0e+00 1239.6 1144 56.8
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 0.0e+00 1238.0 1142 56.6
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 0.0e+00 1231.5 1139 57.8
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 0.0e+00 1231.1 1082 59.2
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 0.0e+00 1224.9 1150 57.7
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 0.0e+00 1224.5 1117 57.1
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 0.0e+00 1218.8 1129 56.4
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 0.0e+00 1218.4 1143 57.5
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 0.0e+00 1216.8 1146 57.1
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1215.3 1129 56.3
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 0.0e+00 1213.4 1128 56.5
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 0.0e+00 1211.4 1129 55.9
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1208.0 1128 56.1
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 0.0e+00 1206.4 1015 60.5
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 0.0e+00 1206.4 1126 55.2
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 0.0e+00 1199.5 1138 55.4
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 0.0e+00 1193.3 1138 55.8
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1185.2 1142 56.4
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 0.0e+00 1182.2 1132 55.7
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 0.0e+00 1167.9 1145 55.2
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 0.0e+00 1129.0 1032 57.2
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 0.0e+00 1119.8 1164 52.2
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 0.0e+00 1094.0 1155 51.3
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 0.0e+00 1092.4 1129 52.3
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 0.0e+00 1080.9 1105 52.9
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 6.9e-303 1044.3 1125 51.6
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 2.0e-286 989.6 897 58.8
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 4.5e-278 961.8 768 62.2
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 7.7e-270 934.5 640 72.7
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 5.1e-266 921.8 651 70.8
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 2.4e-255 886.3 1143 45.0
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 1.0e-253 880.9 1124 44.5
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 4.8e-248 862.1 646 66.7
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 3.5e-230 802.7 646 63.2
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 9.8e-225 784.6 1216 39.1
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 2.9e-224 783.1 558 70.4
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 2.1e-219 766.9 609 65.4
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 8.1e-219 765.0 645 60.5
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 4.4e-217 759.2 1148 40.9
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 2.3e-205 720.3 561 65.6
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 4.4e-201 706.1 1219 36.3
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 7.4e-180 635.6 640 51.4
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 1.3e-176 624.8 463 68.7
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 9.3e-175 618.6 716 47.5
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 1.3e-165 588.2 486 64.6
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 8.5e-160 568.9 506 56.9
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 1.2e-150 538.5 480 60.6
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 1.7e-96 358.6 1580 24.5
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.2e-82 311.2 514 37.2
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 3.6e-78 297.7 585 34.9
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 8.1e-78 296.6 740 33.8
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 8.4e-75 286.6 260 56.5
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 1.3e-70 272.7 553 33.6
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-68 266.2 482 35.1
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-66 259.6 380 42.6
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-61 243.0 580 31.2
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 2.9e-59 235.0 512 33.4
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-52 212.6 671 27.9
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-52 212.6 671 27.9
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 3.8e-51 208.0 209 49.3
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-47 195.7 253 42.3
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-46 193.0 366 36.9
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-42 179.9 193 50.8
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 5.1e-40 171.0 201 48.8
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 4.8e-38 164.5 240 39.6
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-36 159.5 201 44.8
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 4.7e-33 147.9 211 40.3
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-29 135.6 106 57.5
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 3.6e-25 121.7 79 74.7
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 6.1e-25 120.9 240 31.7
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-24 120.2 120 50.0
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 1.5e-18 99.8 133 40.6
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 4.7e-17 94.7 53 77.4
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.4e-16 93.2 112 42.0
EL10Ac2g03601 Beta vulgaris HOM05D004911 ORTHO05D005930 5.2e-16 91.3 58 72.4
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-15 90.1 204 30.4
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-15 90.1 204 30.4
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-15 89.0 55 72.7
Haze_13501 Corylus avellana HOM05D004911 ORTHO05D005930 4.1e-13 81.6 63 61.9
SHI38853 Sapria himalayana HOM05D004911 ORTHO05D005930 7.0e-13 80.9 251 29.5
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-09 68.9 150 34.7
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-06 60.1 93 37.6


User provided reference genes

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