Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0986 Tripterygium wilfordii HOM05D033101 ORTHO05D000047 3.8e-78 294.7 140 100.0
Hma1.2p1_0281F.1_g113200 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-20 102.8 157 43.3
Rhsim07G0041000 Rhododendron simsii HOM05D000432 ORTHO05D000320 2.4e-19 99.4 145 42.8
Hma1.2p1_0017F.1_g011450 Hydrangea macrophylla HOM05D000149 ORTHO05D000047 1.0e-17 94.0 127 45.7
Sabra19G0019600 Salix brachista HOM05D000002 ORTHO05D000047 3.8e-17 92.0 98 49.0
Sabra19G0016100 Salix brachista HOM05D000002 ORTHO05D000047 4.9e-17 91.7 102 47.1
Sabra05G0034800 Salix brachista HOM05D000002 ORTHO05D000047 1.9e-16 89.7 120 45.8
Sabra11G0023800 Salix brachista HOM05D000002 ORTHO05D000047 5.5e-16 88.2 120 45.0
Sabra09G0051700 Salix brachista HOM05D000002 ORTHO05D000047 9.3e-16 87.4 120 45.8
Hma1.2p1_1430F.1_g282970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-15 87.0 141 42.6
RhsimUnG0047900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-15 87.0 67 59.7
Sabra10G0088600 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-15 86.7 120 45.0
Sabra15G0060700 Salix brachista HOM05D000002 ORTHO05D000047 3.5e-15 85.5 121 41.3
QL03p016803 Quercus lobata HOM05D000002 ORTHO05D000047 6.7e-14 81.3 93 47.3
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 8.2e-12 74.3 68 52.9
Prupe.4G150800 Prunus persica HOM05D033101 ORTHO05D000047 1.1e-11 73.9 126 35.7
QL05p076832 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-11 73.9 83 48.2
Sabra16G0094000 Salix brachista HOM05D000179 ORTHO05D000107 1.1e-11 73.9 59 54.2
Hma1.2p1_1543F.1_g289840 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-11 72.8 108 39.8
ECA238G4452 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-11 71.2 137 32.8
TWI12G0032 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 9.0e-11 70.9 140 32.1
PSO339G3264 Papaver somniferum HOM05D000002 ORTHO05D000047 1.5e-10 70.1 89 40.4
SEGI_38276 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.4e-10 68.9 141 34.0
Hma1.2p1_0281F.1_g113140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.5e-10 68.6 109 37.6
Potri.016G106400 Populus trichocarpa HOM05D033101 ORTHO05D000047 1.3e-09 67.0 103 38.8
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-09 66.6 127 40.2
arahy.Tifrunner.gnm1.ann1.P3W6IN Arachis hypogaea HOM05D000002 ORTHO05D000047 3.8e-09 65.5 83 36.1
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.0e-09 65.1 131 34.4
CSS0013767 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-09 64.7 33 72.7
CSS0021782 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-09 64.7 33 72.7
Hma1.2p1_0308F.1_g120220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-09 64.7 73 41.1
RcHm_v2.0_Chr3g0450981 Rosa chinensis HOM05D000002 ORTHO05D000047 1.1e-08 63.9 111 36.0
RcHm_v2.0_Chr3g0460001 Rosa chinensis HOM05D000002 ORTHO05D000047 1.1e-08 63.9 111 36.0
Hma1.2p1_1591F.1_g292490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-08 63.5 90 37.8
Sabra11G0020700 Salix brachista HOM05D000002 ORTHO05D000047 1.4e-08 63.5 61 50.8
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-08 63.5 131 34.4
Hma1.2p1_0292F.1_g115520 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-08 63.2 127 33.1
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 1.9e-08 63.2 91 36.3
SEGI_21402 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.9e-08 63.2 132 34.1
Hma1.2p1_0253F.1_g102890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-08 62.8 96 35.4
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.2e-08 62.4 131 34.4
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.2e-08 62.0 131 33.6
CSS0002445 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-08 61.6 41 61.0
CSS0014458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-08 61.2 33 69.7
PSO339G3906 Papaver somniferum HOM05D000002 ORTHO05D000047 7.2e-08 61.2 140 31.4
Sopen08g009250 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 59.7 80 46.2
Sabra08G0045900 Salix brachista HOM05D000002 ORTHO05D000047 3.6e-07 58.9 103 35.0
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 3.6e-07 58.9 88 40.9
AUR62032213 Chenopodium quinoa HOM05D001471 ORTHO05D000001 6.1e-07 58.2 85 41.2
Ah.10g032180 Amaranthus hybridus HOM05D000002 ORTHO05D000047 7.9e-07 57.8 58 46.6
Sabra16G0272300 Salix brachista HOM05D000002 ORTHO05D000047 7.9e-07 57.8 104 30.8
arahy.Tifrunner.gnm1.ann1.S2CMM5 Arachis hypogaea HOM05D000002 ORTHO05D000047 1.0e-06 57.4 90 38.9
AUR62019058 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 78 39.7
AUR62033068 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 78 39.7
AUR62035159 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 78 39.7
AUR62038241 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 78 39.7
AUR62039020 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 78 39.7
Lalb_Chr24g0400161 Lupinus albus HOM05D000002 ORTHO05D000047 1.0e-06 57.4 60 40.0
Sabra16G0314700 Salix brachista HOM05D000002 ORTHO05D000047 1.0e-06 57.4 113 32.7
Sabra17G0041500 Salix brachista HOM05D000002 ORTHO05D000047 1.0e-06 57.4 113 32.7
Sopen03g021340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.4 71 46.5
AUR62034579 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.8e-06 56.6 74 39.2
ECA238G0736 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.6 137 30.7
Sopen01g028070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 56.6 59 49.2
RcHm_v2.0_Chr3g0451051 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 56.2 106 32.1
CANSAT78G0804 Cannabis sativa HOM05D000002 ORTHO05D000047 3.0e-06 55.8 140 32.1
AUR62012408 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.0e-06 55.8 132 34.8
AUR62012513 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.0e-06 55.8 101 34.7
AUR62015954 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.0e-06 55.8 101 37.6
Sopen01g003530 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen01g006040 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen01g007340 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen01g022700 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen01g027500 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen02g035510 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen03g020100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen03g038760 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g003470 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g006210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g010900 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g012240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g013780 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g014270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen04g031270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen05g003950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen05g006520 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen05g033640 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen06g012710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen06g019260 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen06g019750 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen06g024240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen07g008080 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen07g032500 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen08g014300 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen08g025510 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen09g013130 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen09g026670 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen10g008540 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen11g022110 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen11g023750 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
Sopen12g034280 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.8 59 49.2
CSS0002046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-06 55.5 36 55.6
CSS0017142 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-06 55.5 36 55.6
AUR62010632 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.9e-06 55.5 100 34.0
Ah.01g012030 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.1e-06 55.1 62 41.9
AUR62031157 Chenopodium quinoa HOM05D000287 ORTHO05D000001 5.1e-06 55.1 100 34.0
RcHm_v2.0_Chr5g0078371 Rosa chinensis HOM05D000002 ORTHO05D000001 5.1e-06 55.1 48 47.9
RcHm_v2.0_Chr6g0300481 Rosa chinensis HOM05D000002 ORTHO05D000001 5.1e-06 55.1 48 47.9
Sopen04g009810 Solanum pennellii HOM05D000002 ORTHO05D000047 5.1e-06 55.1 142 28.2
Atru.chr3.2232 Acer truncatum HOM05D000002 ORTHO05D000001 6.7e-06 54.7 134 31.3
AUR62008603 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 85 40.0
AUR62017302 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 132 34.1
AUR62030950 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 79 40.5
AUR62032132 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 132 34.1
Manes.13G000072 Manihot esculenta HOM05D000002 ORTHO05D000047 6.7e-06 54.7 90 36.7
Sabra10G0060400 Salix brachista HOM05D000002 ORTHO05D000047 6.7e-06 54.7 119 37.0
Solyc04g054227.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 6.7e-06 54.7 59 49.2
Sopen04g022060 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 54.7 53 50.9
Sopen06g009400 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 54.7 53 50.9
Sopen09g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 54.7 53 50.9
TWI60G0096 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 6.7e-06 54.7 97 35.1
TWI63G0021 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 6.7e-06 54.7 97 35.1
HanXRQChr15g0494581 Helianthus annuus HOM05D000002 ORTHO05D000047 8.7e-06 54.3 118 31.4


User provided reference genes

Program Settings