Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 8.4e-149 530.4 284 100.0
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 1.4e-132 476.5 279 92.5
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 1.0e-122 443.7 255 85.9
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 1.3e-120 436.8 260 83.8
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 8.2e-120 434.1 255 83.5
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 3.1e-119 432.2 259 83.8
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 1.2e-118 430.3 282 82.3
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 3.5e-118 428.7 255 83.9
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 7.7e-118 427.6 260 83.5
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 1.7e-117 426.4 261 81.6
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 2.2e-117 426.0 257 84.4
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 2.9e-117 425.6 261 80.8
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 2.9e-117 425.6 255 81.6
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 1.1e-116 423.7 276 83.3
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 3.2e-116 422.2 261 80.8
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 3.2e-116 422.2 254 81.9
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 4.2e-116 421.8 258 81.0
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 4.2e-116 421.8 265 81.1
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 7.2e-116 421.0 255 83.1
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 1.2e-115 420.2 256 82.0
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 2.1e-115 419.5 257 81.7
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 2.7e-115 419.1 254 81.5
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 2.7e-115 419.1 257 79.8
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 3.6e-115 418.7 280 76.1
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 4.7e-115 418.3 251 82.9
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 8.0e-115 417.5 257 81.3
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.4e-114 416.8 257 80.9
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 1.4e-114 416.8 257 79.8
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 1.8e-114 416.4 256 78.5
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 4.0e-114 415.2 256 80.5
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 5.2e-114 414.8 274 78.5
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 6.8e-114 414.5 262 79.4
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 8.8e-114 414.1 263 78.7
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 8.8e-114 414.1 265 77.7
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.2e-113 413.7 280 76.4
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 1.2e-113 413.7 260 78.8
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 1.5e-113 413.3 262 78.2
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 1.5e-113 413.3 262 78.2
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 2.0e-113 412.9 261 78.2
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 2.6e-113 412.5 258 79.8
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 2.6e-113 412.5 257 79.8
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 3.4e-113 412.1 251 80.9
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 4.4e-113 411.8 257 79.8
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 5.7e-113 411.4 264 77.3
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 7.5e-113 411.0 262 77.9
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 7.5e-113 411.0 265 77.4
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 1.3e-112 410.2 231 85.7
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 1.7e-112 409.8 264 76.9
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 1.7e-112 409.8 261 77.4
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 2.2e-112 409.5 263 77.6
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 2.2e-112 409.5 278 74.5
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 2.8e-112 409.1 256 78.5
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 3.7e-112 408.7 262 77.5
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 3.7e-112 408.7 262 77.5
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 6.3e-112 407.9 269 77.0
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 8.3e-112 407.5 272 75.0
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 8.3e-112 407.5 285 75.1
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 1.1e-111 407.1 260 77.3
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 1.4e-111 406.8 257 78.6
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 1.8e-111 406.4 260 78.1
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 2.4e-111 406.0 263 76.8
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 3.1e-111 405.6 258 78.7
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 4.1e-111 405.2 262 77.1
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 9.1e-111 404.1 259 76.4
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 9.1e-111 404.1 261 76.6
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 1.2e-110 403.7 257 77.8
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 2.7e-110 402.5 261 75.9
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 2.7e-110 402.5 239 82.4
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 3.5e-110 402.1 258 78.3
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 3.5e-110 402.1 293 70.6
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 3.5e-110 402.1 279 73.1
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 7.7e-110 401.0 260 75.8
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 1.3e-109 400.2 260 75.8
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 1.3e-109 400.2 257 76.3
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 1.7e-109 399.8 337 64.4
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 1.7e-109 399.8 255 77.3
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 2.2e-109 399.4 261 75.5
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 2.9e-109 399.1 226 85.0
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 5.0e-109 398.3 261 77.0
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 5.0e-109 398.3 261 77.0
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 1.5e-108 396.7 252 78.2
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 2.5e-108 396.0 302 67.5
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 4.2e-108 395.2 283 74.9
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 9.4e-108 394.0 259 75.7
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 1.2e-107 393.7 260 75.8
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 6.1e-107 391.3 266 74.1
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 8.0e-107 391.0 260 74.6
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 2.3e-106 389.4 257 77.4
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 3.0e-106 389.0 218 88.1
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 8.8e-106 387.5 224 84.4
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 1.2e-105 387.1 264 73.5
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 2.0e-105 386.3 277 71.8
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 5.7e-105 384.8 228 81.1
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 9.8e-105 384.0 232 79.3
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 1.7e-104 383.3 262 73.3
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 1.7e-104 383.3 256 74.6
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 2.4e-103 379.4 262 72.5
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 4.1e-103 378.6 218 82.1
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 7.0e-103 377.9 260 72.7
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 7.7e-102 374.4 220 81.8
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.9e-100 369.8 260 74.2
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 1.9e-100 369.8 203 88.7
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 3.3e-100 369.0 259 71.8
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 6.1e-99 364.8 257 74.7
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.3e-98 362.8 257 73.2
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 2.3e-98 362.8 245 73.1
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 8.9e-98 360.9 222 77.0
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 1.5e-97 360.1 207 83.6
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 7.5e-97 357.8 273 65.2
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 3.2e-95 352.4 226 76.1
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 7.8e-94 347.8 205 81.5
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 3.9e-93 345.5 253 70.0
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 8.6e-93 344.4 236 79.2
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 1.6e-91 340.1 217 78.8
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.0e-89 333.2 274 66.1
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 3.4e-89 332.4 227 74.4
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 9.8e-89 330.9 220 72.3
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 7.0e-87 324.7 231 67.1
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 3.5e-86 322.4 216 69.9
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 7.1e-79 298.1 226 64.2
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.6e-67 259.2 230 59.6
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 2.3e-61 240.0 139 82.7
HPP92_027344 Vanilla planifolia HOM05D004860 ORTHO05D006366 2.5e-60 236.5 167 71.9
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 5.3e-58 228.8 160 71.2
Nitab4.5_0002954g0030 Nicotiana tabacum HOM05D004860 ORTHO05D006366 3.8e-56 222.6 139 81.3
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.1e-51 206.8 176 66.5
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 7.2e-31 138.7 223 44.4
Cre06.g283034 Chlamydomonas reinhardtii HOM05D004860 ORTHO05D006366 2.7e-30 136.7 252 35.3
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 6.1e-30 135.6 86 74.4
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 2.5e-28 130.2 111 56.8
SHI00369 Sapria himalayana HOM05D004860 ORTHO05D006366 2.2e-27 127.1 100 66.0
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 6.9e-26 122.1 72 79.2
Mapoly0174s0021 Marchantia polymorpha HOM05D004860 ORTHO05D006366 1.4e-23 114.4 87 62.1
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 4.2e-23 112.8 65 73.8
HPP92_027343 Vanilla planifolia HOM05D004860 ORTHO05D006366 9.7e-20 101.7 64 73.4
A02p05180 Brassica napus HOM05D004860 ORTHO05D006366 3.7e-19 99.8 92 59.8
BraA02t05478Z Brassica rapa HOM05D004860 ORTHO05D006366 4.8e-19 99.4 93 60.2
THA.LOC104820105 Tarenaya hassleriana HOM05D001530 ORTHO05D004168 1.8e-18 97.4 53 88.7
Cfa023854 Carpinus fangiana HOM05D004860 ORTHO05D126341 2.6e-17 93.6 203 35.5
CBR_g23273 Chara braunii HOM05D004860 ORTHO05D006366 2.5e-15 87.0 78 53.8
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 1.8e-13 80.9 52 67.3
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 4.8e-11 72.8 41 73.2
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 4.8e-11 72.8 41 70.7
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 3.5e-09 66.6 37 73.0
QL06p004359 Quercus lobata HOM05D004860 ORTHO05D337479 2.5e-07 60.5 55 61.8
HPP92_017189 Vanilla planifolia HOM05D004860 ORTHO05D006366 3.2e-07 60.1 31 87.1


User provided reference genes

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