Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 3.0e-218 761.5 382 100.0
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.9e-143 513.1 333 72.4
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 4.3e-140 501.9 335 70.7
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 7.4e-140 501.1 334 71.6
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.6e-139 500.0 333 69.7
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 8.2e-139 497.7 335 70.4
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.1e-138 497.3 333 71.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.8e-138 496.5 337 69.4
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 3.4e-137 492.3 334 70.1
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 7.6e-137 491.1 335 69.9
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 8.4e-136 487.6 336 70.5
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 8.4e-136 487.6 339 67.6
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.1e-135 487.3 335 67.5
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.4e-135 486.9 353 68.6
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 1.4e-135 486.9 335 67.8
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.5e-135 486.1 333 69.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 2.5e-135 486.1 336 69.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 3.2e-135 485.7 335 66.3
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 9.3e-135 484.2 336 68.5
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-134 483.8 348 65.8
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.2e-134 483.8 336 68.8
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 2.1e-134 483.0 336 69.3
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.5e-134 482.3 333 69.1
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 6.1e-134 481.5 333 68.5
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 7.9e-134 481.1 335 66.6
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.0e-133 480.7 333 68.5
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.5e-132 476.9 335 65.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 1.9e-132 476.5 333 68.5
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 9.7e-132 474.2 333 67.6
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.3e-131 473.8 337 66.8
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 2.4e-130 469.5 334 65.9
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 4.1e-130 468.8 333 65.5
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 4.1e-130 468.8 339 66.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.2e-129 467.2 335 65.4
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.0e-129 466.5 333 66.7
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 3.4e-129 465.7 336 62.8
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.4e-129 465.7 334 66.8
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 4.5e-129 465.3 335 65.7
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.7e-128 463.4 341 67.4
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.9e-128 462.6 335 64.5
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.1e-127 460.7 336 64.3
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.9e-127 459.9 336 67.6
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 7.2e-127 458.0 336 63.7
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 1.2e-126 457.2 339 66.4
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.1e-126 456.4 341 66.6
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.7e-126 456.1 333 64.9
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 3.6e-126 455.7 339 66.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 4.6e-126 455.3 338 65.1
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 4.6e-126 455.3 333 64.6
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 6.1e-126 454.9 299 70.9
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 7.9e-126 454.5 341 66.0
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.3e-125 453.0 333 63.7
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 3.0e-125 452.6 333 64.0
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 5.1e-125 451.8 334 64.4
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 5.1e-125 451.8 333 64.3
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 6.7e-125 451.4 334 63.5
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.1e-124 450.7 301 71.8
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.1e-124 450.7 337 64.4
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.0e-124 449.9 339 65.8
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 3.3e-124 449.1 290 71.0
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 4.3e-124 448.7 335 61.5
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 4.8e-123 445.3 331 61.9
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.4e-122 443.7 333 63.7
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 5.3e-122 441.8 370 59.7
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 4.5e-121 438.7 337 65.3
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.7e-120 436.8 296 68.2
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.4e-119 433.7 296 67.9
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 5.5e-119 431.8 337 63.8
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 7.2e-119 431.4 322 64.9
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 9.4e-119 431.0 337 64.1
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 2.7e-118 429.5 337 63.5
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 2.7e-118 429.5 337 63.5
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 9.7e-116 421.0 338 60.1
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.3e-115 420.6 338 60.7
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.7e-115 420.2 344 58.4
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.1e-114 417.5 374 58.0
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.1e-114 416.0 363 57.6
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 5.9e-113 411.8 367 56.4
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 6.5e-112 408.3 335 58.5
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 6.5e-112 408.3 333 56.2
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.7e-110 402.1 358 56.1
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 6.1e-110 401.7 287 64.8
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 8.0e-110 401.4 334 58.1
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 2.0e-108 396.7 273 68.5
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 8.2e-107 391.3 333 57.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 4.8e-99 365.5 359 51.0
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 4.0e-93 345.9 335 51.0
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 6.8e-93 345.1 240 68.8
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 6.6e-72 275.4 177 72.9
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.5e-71 274.2 214 64.0
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 7.5e-68 261.9 212 59.9
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.4e-66 257.7 349 43.3
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.9e-63 247.3 178 67.4
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 7.3e-63 245.4 322 41.9
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 7.3e-63 245.4 213 54.5
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 6.2e-62 242.3 202 57.9
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 7.6e-60 235.3 159 73.6
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.4e-58 230.3 180 60.0
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.2e-43 180.6 141 61.0
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.3e-39 166.8 147 55.1
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.3e-38 164.9 347 32.6
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.6e-38 163.3 197 45.7
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.9e-34 151.0 111 64.9
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-20 104.8 68 70.6
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.9e-18 97.8 301 28.2
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 3.5e-17 93.6 80 56.2
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 6.1e-17 92.8 310 28.4
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.8e-16 91.3 66 66.7
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.5e-15 88.2 335 26.6
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.4e-13 80.9 352 24.7
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.0e-12 77.8 69 49.3
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.0e-11 73.2 111 36.0
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 6.5e-11 72.8 68 51.5
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-09 68.6 39 76.9
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.3e-07 60.5 39 71.8
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 6.3e-06 56.2 33 75.8


User provided reference genes

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