Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 9.5e-198 693.3 360 100.0
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 7.8e-107 391.3 338 58.3
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 3.9e-106 389.0 341 58.7
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 1.5e-105 387.1 340 59.7
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 2.5e-105 386.3 342 59.6
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 1.2e-104 384.0 346 57.5
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 8.0e-104 381.3 340 58.8
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 1.0e-103 380.9 339 57.8
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 1.4e-103 380.6 340 59.1
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 6.8e-103 378.3 342 58.5
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 8.9e-103 377.9 344 56.7
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 7.5e-102 374.8 338 57.4
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 1.7e-101 373.6 342 58.5
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 1.9e-100 370.2 344 56.4
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.2e-99 367.5 342 55.6
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.6e-99 367.1 339 55.8
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.0e-98 364.4 342 55.3
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 1.3e-98 364.0 343 56.3
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 5.0e-98 362.1 343 55.7
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.6e-98 361.7 345 55.4
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.6e-97 358.6 345 55.4
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 5.6e-97 358.6 342 55.3
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 1.2e-96 357.5 339 55.5
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 2.1e-96 356.7 338 55.3
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 2.8e-96 356.3 339 55.2
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 1.1e-95 354.4 339 58.1
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 4.0e-95 352.4 348 54.6
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.0e-95 352.4 348 54.6
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.0e-95 352.4 348 54.6
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.0e-95 352.4 348 54.6
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 1.7e-93 347.1 338 53.0
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 2.2e-93 346.7 344 54.9
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 8.3e-93 344.7 344 54.7
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 7.1e-92 341.7 345 52.8
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 4.6e-91 339.0 340 51.8
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 6.6e-90 335.1 336 54.2
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 4.3e-89 332.4 340 51.5
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 5.6e-89 332.0 330 53.0
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 9.5e-89 331.3 338 50.3
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 4.7e-88 328.9 345 50.7
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 6.2e-88 328.6 329 52.3
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 8.1e-88 328.2 341 51.6
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 5.2e-87 325.5 338 53.6
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 1.5e-86 323.9 343 50.4
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 2.6e-86 323.2 339 49.9
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 3.7e-85 319.3 344 50.6
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 3.7e-85 319.3 340 51.2
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 6.4e-85 318.5 338 50.9
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.1e-84 317.8 336 51.8
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 2.4e-84 316.6 345 51.6
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 7.8e-83 311.6 345 50.7
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 1.0e-82 311.2 344 49.4
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 6.6e-82 308.5 344 49.4
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 8.6e-82 308.1 339 51.9
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 8.6e-82 308.1 345 49.0
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 1.1e-81 307.8 335 49.3
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 3.3e-81 306.2 306 51.0
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 5.6e-81 305.4 342 48.8
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 2.8e-80 303.1 324 49.1
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 8.1e-80 301.6 347 49.0
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 1.1e-79 301.2 331 48.9
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 1.4e-79 300.8 344 46.8
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 6.8e-79 298.5 347 47.3
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 8.9e-79 298.1 345 47.5
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 1.2e-78 297.7 344 48.3
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 3.4e-78 296.2 320 50.0
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 2.2e-77 293.5 342 49.4
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 6.4e-77 292.0 347 45.5
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 8.4e-77 291.6 347 44.7
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 1.9e-76 290.4 327 46.2
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 2.4e-76 290.0 344 49.1
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 5.4e-76 288.9 344 45.6
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 5.1e-74 282.3 348 44.3
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 5.1e-74 282.3 348 44.3
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 5.1e-74 282.3 348 44.3
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 1.9e-73 280.4 343 46.1
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 3.3e-73 279.6 243 59.3
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.3e-72 277.7 321 45.5
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 1.6e-72 277.3 342 42.7
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 2.8e-72 276.6 321 44.9
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 1.1e-71 274.6 345 46.1
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 1.8e-71 273.9 321 44.5
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 1.2e-70 271.2 322 46.3
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 1.5e-70 270.8 337 46.3
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.0e-70 270.4 343 43.1
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.0e-70 270.4 320 45.9
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 3.4e-70 269.6 343 44.6
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.4e-68 263.5 288 47.6
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 6.0e-67 258.8 346 44.5
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.7e-66 257.3 325 44.3
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 5.6e-65 252.3 357 39.8
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 9.9e-62 241.5 331 42.6
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 2.9e-61 240.0 310 44.8
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 1.4e-60 237.7 347 39.8
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 4.2e-60 236.1 347 43.5
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 3.9e-58 229.6 322 42.5
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 5.6e-57 225.7 326 43.3
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 1.6e-56 224.2 262 46.6
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.7e-51 206.8 243 48.1
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 4.6e-51 206.1 215 47.9
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 1.0e-50 204.9 225 47.6
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 2.1e-48 197.2 320 37.5
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 5.3e-47 192.6 328 40.9
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 1.1e-44 184.9 323 35.0
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 4.6e-43 179.5 322 36.3
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 2.3e-42 177.2 322 36.0
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 1.1e-39 168.3 132 61.4
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 9.0e-39 165.2 322 35.4
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 6.1e-35 152.5 140 55.7
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 2.3e-34 150.6 180 48.9
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 6.7e-34 149.1 234 38.0
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 1.5e-33 147.9 233 37.8
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 2.5e-33 147.1 294 32.3
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 2.2e-29 134.0 198 39.4
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 3.0e-26 123.6 273 30.4
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 4.4e-25 119.8 153 43.1
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 9.1e-23 112.1 144 43.8
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 6.1e-19 99.4 132 42.4
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 6.7e-18 95.9 112 45.5
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 6.7e-18 95.9 112 45.5
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 6.7e-18 95.9 118 44.1
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 8.8e-18 95.5 97 51.5
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 5.7e-17 92.8 118 43.2
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 5.7e-17 92.8 127 42.5
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 5.7e-17 92.8 118 43.2
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 2.2e-16 90.9 118 41.5
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 2.2e-16 90.9 118 41.5
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 4.8e-16 89.7 191 33.0
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 1.1e-15 88.6 118 42.4
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.2e-14 85.1 68 60.3
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 3.2e-12 77.0 101 40.6
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 1.0e-10 72.0 210 26.7
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 3.4e-09 67.0 77 45.5
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 1.7e-08 64.7 112 36.6
Haze_20405 Corylus avellana HOM05D005574 ORTHO05D007102 5.9e-06 56.2 60 48.3


User provided reference genes

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