Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.3e-51 205.3 104 100.0
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.2e-46 188.7 104 91.3
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 4.9e-46 187.6 104 90.4
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 2.1e-44 182.2 104 86.5
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 1.0e-43 179.9 104 86.5
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 3.9e-43 177.9 104 84.6
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 5.1e-43 177.6 104 84.6
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 1.5e-42 176.0 104 86.5
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 1.9e-42 175.6 104 82.7
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.9e-42 175.6 104 85.6
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 3.3e-42 174.9 105 87.6
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 5.6e-42 174.1 104 84.6
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 5.6e-42 174.1 104 84.6
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 9.6e-42 173.3 104 84.6
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-41 172.9 104 82.7
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-41 172.9 104 82.7
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 1.3e-41 172.9 104 83.7
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 1.3e-41 172.9 104 85.6
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 1.6e-41 172.6 104 86.5
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 1.6e-41 172.6 104 84.6
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 1.6e-41 172.6 104 83.7
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 1.6e-41 172.6 104 84.6
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 2.1e-41 172.2 103 85.4
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 84.6
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 83.7
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 82.7
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 3.6e-41 171.4 103 83.5
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 4.8e-41 171.0 104 82.7
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 4.8e-41 171.0 104 82.7
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 4.8e-41 171.0 104 82.7
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 4.8e-41 171.0 104 84.6
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 4.8e-41 171.0 103 84.5
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 6.2e-41 170.6 104 83.7
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 6.2e-41 170.6 104 85.6
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 8.1e-41 170.2 104 82.7
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 8.1e-41 170.2 103 84.5
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 1.1e-40 169.9 104 81.7
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 1.4e-40 169.5 104 82.7
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 1.4e-40 169.5 104 86.5
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.8e-40 169.1 105 83.8
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 2.4e-40 168.7 104 85.6
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 3.1e-40 168.3 103 86.4
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 3.1e-40 168.3 103 86.4
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 3.1e-40 168.3 104 82.7
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 3.1e-40 168.3 105 82.9
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 4.0e-40 167.9 104 84.6
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 5.3e-40 167.5 104 81.7
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 5.3e-40 167.5 106 84.0
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 5.3e-40 167.5 101 81.2
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 5.3e-40 167.5 104 82.7
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 5.3e-40 167.5 104 82.7
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 6.9e-40 167.2 104 81.7
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 9.0e-40 166.8 104 80.8
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 9.0e-40 166.8 104 82.7
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 1.2e-39 166.4 104 83.7
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 1.5e-39 166.0 104 82.7
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 2.6e-39 165.2 103 83.5
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 3.4e-39 164.9 104 76.9
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 3.4e-39 164.9 104 80.8
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 3.4e-39 164.9 104 79.8
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 4.5e-39 164.5 105 80.0
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 7.6e-39 163.7 107 79.4
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 9.9e-39 163.3 104 80.8
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 9.9e-39 163.3 104 80.8
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 1.3e-38 162.9 104 80.8
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 1.3e-38 162.9 107 81.3
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 79.6
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 79.6
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 1.3e-38 162.9 104 78.8
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 1.7e-38 162.5 104 78.8
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 1.7e-38 162.5 104 78.8
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 1.7e-38 162.5 107 81.3
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 1.7e-38 162.5 104 78.8
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.2e-38 162.2 104 82.7
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 2.2e-38 162.2 107 80.4
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 2.2e-38 162.2 104 78.8
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.2e-38 162.2 104 79.8
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.2e-38 162.2 104 79.8
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 2.9e-38 161.8 104 79.8
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 2.9e-38 161.8 104 76.9
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 3.8e-38 161.4 104 76.0
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 3.8e-38 161.4 104 79.8
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 6.4e-38 160.6 104 77.9
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 1.1e-37 159.8 104 76.9
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 1.4e-37 159.5 104 76.9
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.4e-37 159.5 106 73.6
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.4e-37 159.5 106 73.6
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 1.4e-37 159.5 101 78.2
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 1.4e-37 159.5 100 83.0
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 1.9e-37 159.1 106 73.6
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.9e-37 159.1 106 73.6
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 4.2e-37 157.9 106 72.6
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 9.3e-37 156.8 106 79.2
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 2.7e-36 155.2 105 80.0
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 3.5e-36 154.8 94 80.9
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 3.5e-36 154.8 94 80.9
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 1.0e-35 153.3 100 78.0
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 1.3e-35 152.9 95 83.2
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 1.8e-35 152.5 87 85.1
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 1.8e-35 152.5 106 76.4
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 2.3e-35 152.1 104 77.9
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 3.0e-35 151.8 107 76.6
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 5.6e-34 147.5 97 77.3
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 7.4e-34 147.1 99 76.8
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 9.6e-34 146.7 98 77.6
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 1.6e-33 146.0 95 76.8
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 1.4e-32 142.9 104 72.1
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.8e-32 142.5 73 93.2
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 5.3e-32 141.0 95 74.7
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 2.6e-31 138.7 98 74.5
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 5.5e-29 131.0 99 68.7
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 2.7e-28 128.6 86 74.4
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 6.0e-28 127.5 73 82.2
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 5.1e-27 124.4 69 82.6
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 3.7e-25 118.2 87 69.0
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 2.9e-22 108.6 70 71.4
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 1.1e-21 106.7 73 67.1
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 5.5e-21 104.4 74 64.9
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 3.9e-19 98.2 104 57.7
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 3.3e-18 95.1 68 70.6
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 3.3e-18 95.1 68 70.6
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 5.7e-18 94.4 56 78.6
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 7.4e-18 94.0 64 64.1
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 1.6e-17 92.8 80 53.8
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-16 90.1 89 57.3
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 1.2e-15 86.7 55 65.5
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 2.0e-15 85.9 65 58.5
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 3.8e-14 81.6 105 52.4
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 2.0e-07 59.3 82 41.5


User provided reference genes

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