Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.6e-35 151.0 74 100.0
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.4e-33 144.4 74 95.9
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.0e-29 131.3 74 85.1
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 5.1e-29 130.6 71 88.7
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.1e-29 130.6 71 88.7
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.1e-29 130.6 71 88.7
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.5e-28 129.0 71 87.3
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.9e-28 128.6 74 81.1
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-28 128.3 74 85.1
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 4.3e-28 127.5 71 85.9
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 4.3e-28 127.5 71 84.5
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 5.6e-28 127.1 71 80.3
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 5.6e-28 127.1 71 84.5
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 7.3e-28 126.7 74 79.7
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 7.3e-28 126.7 74 79.7
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 7.3e-28 126.7 74 79.7
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.3e-27 125.9 71 81.7
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.3e-27 125.9 71 85.9
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.3e-27 125.9 71 81.7
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 2.1e-27 125.2 74 78.4
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 2.8e-27 124.8 72 81.9
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 4.8e-27 124.0 71 83.1
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 4.8e-27 124.0 71 83.1
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 4.8e-27 124.0 71 84.5
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-26 122.9 70 80.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.1e-26 122.9 70 80.0
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.4e-26 122.5 70 80.0
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.8e-26 122.1 71 74.6
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 2.4e-26 121.7 71 77.5
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 3.1e-26 121.3 71 80.3
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.0e-26 120.9 74 78.4
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 4.0e-26 120.9 74 77.0
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 5.3e-26 120.6 70 80.0
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 70 80.0
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.3e-26 120.6 74 78.4
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 5.3e-26 120.6 71 80.3
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 6.9e-26 120.2 71 76.1
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 77.8
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 6.9e-26 120.2 71 78.9
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.2e-25 119.4 71 81.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 3.4e-25 117.9 71 78.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 3.4e-25 117.9 71 78.9
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 3.4e-25 117.9 84 70.2
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 4.4e-25 117.5 71 80.3
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.4e-25 117.5 71 81.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.6e-25 116.7 74 77.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.6e-25 116.7 74 77.0
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 9.9e-25 116.3 71 80.3
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 9.9e-25 116.3 71 80.3
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 9.9e-25 116.3 71 80.3
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 9.9e-25 116.3 70 74.3
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 9.9e-25 116.3 74 78.4
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 71 80.3
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.7e-24 115.5 67 79.1
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.2e-24 115.2 71 78.9
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 2.2e-24 115.2 71 74.6
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.9e-24 114.8 69 76.8
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.9e-24 114.8 68 79.4
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 2.9e-24 114.8 71 74.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.9e-24 114.8 71 74.6
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 3.8e-24 114.4 71 76.1
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 4.9e-24 114.0 72 80.6
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 6.4e-24 113.6 70 74.3
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 8.4e-24 113.2 71 76.1
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.4e-23 112.5 65 78.5
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.4e-23 112.5 71 71.8
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.4e-23 111.7 71 74.6
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 4.2e-23 110.9 71 73.2
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 4.2e-23 110.9 68 76.5
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 4.2e-23 110.9 65 76.9
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 5.4e-23 110.5 71 71.8
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 5.4e-23 110.5 70 71.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 9.3e-23 109.8 59 83.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.5e-22 107.8 65 76.9
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 4.6e-22 107.5 69 76.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.3e-21 105.9 65 72.3
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.3e-21 105.9 65 75.4
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 8.7e-21 103.2 66 72.7
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.1e-20 102.8 70 74.3
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.5e-20 102.4 84 65.5
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 9.6e-20 99.8 83 61.4
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.3e-19 99.4 71 69.0
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.3e-19 99.4 100 55.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 2.8e-19 98.2 71 73.2
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 5.3e-18 94.0 71 70.4
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 5.3e-18 94.0 64 65.6
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 9.0e-18 93.2 69 71.0
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.2e-17 92.8 60 71.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.2e-17 92.8 52 86.5
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.2e-16 88.6 130 43.8
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.4e-15 85.9 136 40.4
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.9e-15 85.5 49 81.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 9.3e-15 83.2 51 72.5
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.1e-14 82.0 168 34.5
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 5.1e-13 77.4 39 92.3
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 6.7e-13 77.0 70 57.1
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 3.3e-12 74.7 42 83.3
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.3e-12 74.3 42 83.3
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 2.1e-11 72.0 42 81.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 3.7e-11 71.2 42 78.6
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 3.7e-11 71.2 42 78.6
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 8.1e-11 70.1 41 82.9
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 8.1e-11 70.1 50 62.0
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.4e-10 69.3 41 80.5
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.8e-10 68.9 39 79.5
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 5.3e-10 67.4 42 76.2
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 5.8e-09 63.9 41 70.7
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 4.9e-08 60.8 54 61.1
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 2.5e-07 58.5 32 81.2
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 5.5e-07 57.4 34 73.5
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.5e-07 57.4 35 77.1
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.2e-06 56.2 56 51.8
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 3.5e-06 54.7 40 57.5


User provided reference genes

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