Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0135 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 4.2e-81 304.7 158 100.0
TWI09G0556 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 2.2e-66 255.8 177 79.1
TWI73G0275 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 8.0e-48 194.1 160 70.0
Haze_15306 Corylus avellana HOM05D004032 ORTHO05D004462 1.3e-45 186.8 218 54.6
CiPaw.02G004200 Carya illinoinensis HOM05D004032 ORTHO05D004462 1.2e-43 180.3 221 50.7
QL06p039858 Quercus lobata HOM05D004032 ORTHO05D004462 3.5e-43 178.7 211 53.1
CiPaw.01G006700 Carya illinoinensis HOM05D004032 ORTHO05D004462 2.0e-38 162.9 220 49.5
RcHm_v2.0_Chr2g0107481 Rosa chinensis HOM05D004032 ORTHO05D004462 5.7e-38 161.4 187 56.7
VMungo0251G2494 Vigna mungo HOM05D004032 ORTHO05D004462 7.5e-38 161.0 209 50.2
Manes.13G113400 Manihot esculenta HOM05D004032 ORTHO05D004462 1.7e-37 159.8 214 49.5
Potri.007G053300 Populus trichocarpa HOM05D004032 ORTHO05D004462 2.2e-37 159.5 218 49.5
Glyma.17G163400 Glycine max HOM05D004032 ORTHO05D004462 2.8e-37 159.1 201 51.2
Phvul.003G236700 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 3.7e-37 158.7 210 50.5
Lj4g0009335 Lotus japonicus HOM05D004032 ORTHO05D004462 6.3e-37 157.9 195 54.9
Prupe.6G223500 Prunus persica HOM05D004032 ORTHO05D004462 6.3e-37 157.9 225 50.2
Sabra05G0116500 Salix brachista HOM05D004032 ORTHO05D004462 8.3e-37 157.5 199 50.3
FvH4_1g17290 Fragaria vesca HOM05D004032 ORTHO05D004462 1.1e-36 157.1 175 56.0
FAN19G2997 Fragaria x ananassa HOM05D004032 ORTHO05D004462 1.1e-36 157.1 175 56.0
Psat4g083520 Pisum sativum HOM05D004032 ORTHO05D004462 1.1e-36 157.1 200 49.0
FAN28G1831 Fragaria x ananassa HOM05D004032 ORTHO05D004462 1.8e-36 156.4 185 53.5
Medtr4g095440 Medicago truncatula HOM05D004032 ORTHO05D004462 3.1e-36 155.6 203 49.3
TPR.G23878 Trifolium pratense HOM05D004032 ORTHO05D004462 3.1e-36 155.6 199 48.7
Glyma.05G103900 Glycine max HOM05D004032 ORTHO05D004462 9.2e-36 154.1 209 47.4
Manes.12G111200 Manihot esculenta HOM05D004032 ORTHO05D004462 9.2e-36 154.1 221 46.6
TAR376G0432 Trochodendron aralioides HOM05D004032 ORTHO05D004462 9.2e-36 154.1 202 50.0
Dinv30069 Davidia involucrata HOM05D004032 ORTHO05D004462 1.6e-35 153.3 201 49.8
GSVIVG01000145001 Vitis vinifera HOM05D004032 ORTHO05D004462 1.6e-35 153.3 213 47.4
Thecc.01G069300 Theobroma cacao HOM05D004032 ORTHO05D004462 2.0e-35 152.9 208 48.6
Potri.005G145800 Populus trichocarpa HOM05D004032 ORTHO05D004462 2.7e-35 152.5 216 48.1
COL.COLO4_11544 Corchorus olitorius HOM05D004032 ORTHO05D004462 4.5e-35 151.8 182 53.3
Duzib147G1493 Durio zibethinus HOM05D004032 ORTHO05D004462 7.7e-35 151.0 215 47.4
Gohir.D11G206500 Gossypium hirsutum HOM05D004032 ORTHO05D004462 1.3e-34 150.2 211 48.8
Gorai.007G221700 Gossypium raimondii HOM05D004032 ORTHO05D004462 1.3e-34 150.2 211 48.8
Gohir.A11G216800 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.3e-34 149.4 211 48.8
Dinv26906 Davidia involucrata HOM05D004032 ORTHO05D004462 2.9e-34 149.1 198 51.0
Duzib187G1312 Durio zibethinus HOM05D004032 ORTHO05D004462 2.9e-34 149.1 211 49.8
Actinidia16438 Actinidia chinensis HOM05D004032 ORTHO05D004462 1.5e-33 146.7 178 52.8
CSS0002661 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 7.3e-33 144.4 208 48.6
Ciclev10026503m.g Citrus clementina HOM05D004032 ORTHO05D004462 9.5e-33 144.1 207 49.3
vmacro05391 Vaccinium macrocarpon HOM05D004032 ORTHO05D004462 9.5e-33 144.1 182 52.7
CSS0031607 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 2.8e-32 142.5 208 48.1
Rhsim10G0102400 Rhododendron simsii HOM05D004032 ORTHO05D004462 6.1e-32 141.4 185 52.4
DCAR_025783 Daucus carota HOM05D004032 ORTHO05D004462 8.0e-32 141.0 221 44.8
vmacro17992 Vaccinium macrocarpon HOM05D004032 ORTHO05D004462 6.8e-31 137.9 179 47.5
Gohir.A10G090100 Gossypium hirsutum HOM05D004032 ORTHO05D004462 8.9e-31 137.5 163 52.1
Oeu054187.1 Olea europaea HOM05D004032 ORTHO05D004462 1.7e-29 133.3 184 50.0
Rhsim08G0095200 Rhododendron simsii HOM05D004032 ORTHO05D004462 2.2e-29 132.9 179 48.6
FAN26G2221 Fragaria x ananassa HOM05D004032 ORTHO05D004462 2.9e-29 132.5 184 49.5
Gorai.011G107600 Gossypium raimondii HOM05D004032 ORTHO05D004462 2.9e-29 132.5 163 50.9
Hma1.2p1_0942F.1_g239820 Hydrangea macrophylla HOM05D004032 ORTHO05D004462 6.4e-29 131.3 212 44.8
Glyma.01G192400 Glycine max HOM05D004032 ORTHO05D004462 4.1e-28 128.6 215 42.8
HanXRQChr12g0373191 Helianthus annuus HOM05D004032 ORTHO05D004462 4.1e-28 128.6 183 46.4
Gohir.A02G153200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 5.4e-28 128.3 202 46.0
Gohir.D03G027200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 5.4e-28 128.3 203 46.8
Gohir.D10G098000 Gossypium hirsutum HOM05D004032 ORTHO05D004462 5.4e-28 128.3 164 50.6
Gorai.003G028900 Gossypium raimondii HOM05D004032 ORTHO05D004462 7.0e-28 127.9 204 46.6
MD15G1293900 Malus domestica HOM05D004032 ORTHO05D004462 7.0e-28 127.9 238 43.3
Cpa.g.sc6.44 Carica papaya HOM05D004032 ORTHO05D004462 2.0e-27 126.3 207 44.0
Actinidia21232 Actinidia chinensis HOM05D004032 ORTHO05D004462 2.7e-27 125.9 135 55.6
Glyma.11G049700 Glycine max HOM05D004032 ORTHO05D004462 2.7e-27 125.9 218 43.6
Sed0022630 Sechium edule HOM05D004032 ORTHO05D004462 4.6e-27 125.2 178 47.2
Glyma.15G185500 Glycine max HOM05D004032 ORTHO05D004462 5.9e-27 124.8 182 46.2
FAN23G1545 Fragaria x ananassa HOM05D004032 ORTHO05D004462 1.0e-26 124.0 184 46.2
CsaV3_6G043920 Cucumis sativus L. HOM05D004032 ORTHO05D004462 1.3e-26 123.6 200 43.5
MSTRG.2833 Avicennia marina HOM05D004032 ORTHO05D004462 1.7e-26 123.2 181 48.1
Oeu040591.1 Olea europaea HOM05D004032 ORTHO05D004462 1.7e-26 123.2 180 48.9
Oeu040592.1 Olea europaea HOM05D004032 ORTHO05D004462 1.7e-26 123.2 180 48.9
DCAR_010831 Daucus carota HOM05D004032 ORTHO05D004462 3.0e-26 122.5 202 44.6
MD02G1182600 Malus domestica HOM05D004032 ORTHO05D004462 3.0e-26 122.5 236 44.1
PGR004G0357 Punica granatum HOM05D004032 ORTHO05D004462 3.0e-26 122.5 185 47.0
MSTRG.23688 Avicennia marina HOM05D004032 ORTHO05D004462 5.0e-26 121.7 188 46.8
Lalb_Chr16g0389141 Lupinus albus HOM05D004032 ORTHO05D004462 8.6e-26 120.9 196 44.4
Aqoxy6G02719 Aquilegia oxysepala HOM05D004032 ORTHO05D004462 1.1e-25 120.6 216 41.2
PSO541G5875 Papaver somniferum HOM05D004032 ORTHO05D004462 1.1e-25 120.6 201 44.8
ClCG01G017390 Citrullus lanatus HOM05D004032 ORTHO05D004462 1.9e-25 119.8 205 42.9
Nitab4.5_0000868g0010 Nicotiana tabacum HOM05D004032 ORTHO05D004462 2.5e-25 119.4 208 45.2
Lalb_Chr05g0213571 Lupinus albus HOM05D004032 ORTHO05D004462 3.3e-25 119.0 218 43.6
Lsat_1_v5_gn_4_162340 Lactuca sativa HOM05D004032 ORTHO05D004462 4.3e-25 118.6 183 44.8
Eucgr.I00716 Eucalyptus grandis HOM05D004032 ORTHO05D004462 7.3e-25 117.9 209 43.5
Oeu013283.1 Olea europaea HOM05D004032 ORTHO05D004462 7.3e-25 117.9 208 41.8
TAR628G1371 Trochodendron aralioides HOM05D004032 ORTHO05D004462 7.3e-25 117.9 186 45.7
VMungo1215G3265 Vigna mungo HOM05D004032 ORTHO05D004462 7.3e-25 117.9 145 53.1
SGA_v2.0_scaffold15G07422 Striga asiatica HOM05D004032 ORTHO05D004462 9.5e-25 117.5 165 47.3
PSO675G6353 Papaver somniferum HOM05D004032 ORTHO05D004462 2.1e-24 116.3 202 43.1
Lj7A88G34 Lonicera japonica HOM05D004032 ORTHO05D004462 4.7e-24 115.2 157 47.1
Cc07_g06860 Coffea canephora HOM05D004032 ORTHO05D004462 8.0e-24 114.4 222 41.9
Lalb_Chr09g0334051 Lupinus albus HOM05D004032 ORTHO05D004462 8.0e-24 114.4 190 42.1
Actinidia36441 Actinidia chinensis HOM05D004032 ORTHO05D004462 1.0e-23 114.0 183 45.4
CAN.G1075.18 Capsicum annuum HOM05D004032 ORTHO05D004462 1.4e-23 113.6 219 41.1
HanXRQChr11g0322451 Helianthus annuus HOM05D004032 ORTHO05D004462 1.8e-23 113.2 186 44.6
Phvul.002G012400 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 6.8e-23 111.3 148 50.7
Actinidia11994 Actinidia chinensis HOM05D004032 ORTHO05D004462 8.9e-23 110.9 130 52.3
Sopen02g037160 Solanum pennellii HOM05D004032 ORTHO05D004462 8.9e-23 110.9 219 41.6
Lj2g0017817 Lotus japonicus HOM05D004032 ORTHO05D004462 2.6e-22 109.4 200 42.5
Hma1.2p1_0017F.1_g012150 Hydrangea macrophylla HOM05D004032 ORTHO05D004462 3.4e-22 109.0 192 41.7
Peaxi162Scf00264g00213 Petunia axillaris HOM05D004032 ORTHO05D004462 3.4e-22 109.0 230 40.4
CSS0022714 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 4.4e-22 108.6 185 43.2
Aa31LG1G15950 Aethionema arabicum HOM05D004032 ORTHO05D004462 5.8e-22 108.2 183 44.3
PGSC0003DMG400024938 Solanum tuberosum HOM05D004032 ORTHO05D004462 5.8e-22 108.2 206 42.2
Lj4A160G62 Lonicera japonica HOM05D004032 ORTHO05D004462 1.7e-21 106.7 124 50.8
Solyc02g092590.3 Solanum lycopersicum HOM05D004032 ORTHO05D004462 3.7e-21 105.5 214 42.5
SalBow6G2131 Salvia bowleyana HOM05D004032 ORTHO05D004462 4.9e-21 105.1 158 43.0
CSS0026387 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 8.3e-21 104.4 192 41.7
BcaB04g20056 Brassica carinata HOM05D004032 ORTHO05D004462 1.1e-20 104.0 166 41.6
ECA232G3054 Erigeron canadensis HOM05D004032 ORTHO05D004462 1.4e-20 103.6 178 41.6
Oeu031172.1 Olea europaea HOM05D004032 ORTHO05D004462 1.4e-20 103.6 206 40.3
Oeu031171.1 Olea europaea HOM05D004032 ORTHO05D004462 2.4e-20 102.8 206 40.3
BcaC03g18375 Brassica carinata HOM05D004032 ORTHO05D004462 3.2e-20 102.4 178 41.0
C02p64510 Brassica napus HOM05D004032 ORTHO05D004462 3.2e-20 102.4 178 41.0
BolC2t12515H Brassica oleracea HOM05D004032 ORTHO05D004462 3.2e-20 102.4 178 41.0
A02p44240 Brassica napus HOM05D004032 ORTHO05D004462 4.1e-20 102.1 174 39.7
BraA02t09348Z Brassica rapa HOM05D004032 ORTHO05D004462 4.1e-20 102.1 174 39.7
THA.LOC104819252 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 4.1e-20 102.1 173 42.2
Nn5g30527 Nelumbo nucifera HOM05D004032 ORTHO05D004462 9.2e-20 100.9 130 46.2
Migut.H00365 Erythranthe guttata HOM05D004032 ORTHO05D004462 2.0e-19 99.8 209 38.3
C07p24210 Brassica napus HOM05D004032 ORTHO05D004462 2.7e-19 99.4 173 40.5
BolC7t42948H Brassica oleracea HOM05D004032 ORTHO05D004462 2.7e-19 99.4 173 40.5
Thhalv10005011m.g Eutrema salsugineum HOM05D004032 ORTHO05D004462 6.0e-19 98.2 176 39.8
Sed0016234 Sechium edule HOM05D004032 ORTHO05D004462 7.8e-19 97.8 166 43.4
Nn1g04611 Nelumbo nucifera HOM05D004032 ORTHO05D004462 1.0e-18 97.4 196 37.2
BraA09t36588Z Brassica rapa HOM05D004032 ORTHO05D004462 5.0e-18 95.1 174 41.4
Sp2g29270 Schrenkiella parvula HOM05D004032 ORTHO05D004462 5.0e-18 95.1 177 39.0
A07p16510 Brassica napus HOM05D004032 ORTHO05D004462 8.6e-18 94.4 173 39.3
A09p09370 Brassica napus HOM05D004032 ORTHO05D004462 8.6e-18 94.4 174 41.4
C09p10940 Brassica napus HOM05D004032 ORTHO05D004462 8.6e-18 94.4 174 41.4
BraA07t29375Z Brassica rapa HOM05D004032 ORTHO05D004462 8.6e-18 94.4 173 39.3
Sed0024584 Sechium edule HOM05D004032 ORTHO05D004462 8.6e-18 94.4 171 40.9
CARHR280210 Cardamine hirsuta HOM05D004032 ORTHO05D004462 1.1e-17 94.0 105 49.5
Hund13934 Selenicereus undatus HOM05D004032 ORTHO05D004462 1.1e-17 94.0 218 34.9
BcaB02g09927 Brassica carinata HOM05D004032 ORTHO05D004462 1.5e-17 93.6 176 39.8
BcaC04g23221 Brassica carinata HOM05D004032 ORTHO05D004462 1.5e-17 93.6 173 41.0
BolC9t53989H Brassica oleracea HOM05D004032 ORTHO05D004462 1.5e-17 93.6 173 41.0
AL8G43930 Arabidopsis lyrata HOM05D004032 ORTHO05D004462 3.3e-17 92.4 174 37.4
arahy.Tifrunner.gnm1.ann1.4VG7J5 Arachis hypogaea HOM05D004032 ORTHO05D004462 3.3e-17 92.4 224 37.5
Ah.02g125580 Amaranthus hybridus HOM05D004032 ORTHO05D004462 9.5e-17 90.9 192 40.1
THA.LOC104827558 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 9.5e-17 90.9 115 47.8
THA.LOC104821233 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 1.2e-16 90.5 122 45.1
BcaC06g34822 Brassica carinata HOM05D004032 ORTHO05D004462 1.6e-16 90.1 173 38.2
arahy.Tifrunner.gnm1.ann1.L7L2H1 Arachis hypogaea HOM05D004032 ORTHO05D004462 2.1e-16 89.7 119 47.1
HanXRQChr14g0441881 Helianthus annuus HOM05D004032 ORTHO05D004462 2.1e-16 89.7 154 42.9
HPP92_023674 Vanilla planifolia HOM05D004032 ORTHO05D004462 2.1e-16 89.7 193 36.8
HPP92_023691 Vanilla planifolia HOM05D004032 ORTHO05D004462 2.1e-16 89.7 193 36.8
AT5G67390 Arabidopsis thaliana HOM05D004032 ORTHO05D004462 2.8e-16 89.4 102 48.0
Atru.chr3.192 Acer truncatum HOM05D004032 ORTHO05D004462 4.7e-16 88.6 209 34.9
Atru.chr3.163 Acer truncatum HOM05D004032 ORTHO05D004462 6.2e-16 88.2 206 35.4
arahy.Tifrunner.gnm1.ann1.7C4JLW Arachis hypogaea HOM05D004032 ORTHO05D004462 6.2e-16 88.2 119 47.9
ECA238G1032 Erigeron canadensis HOM05D004032 ORTHO05D004462 8.1e-16 87.8 169 39.1
Carub.0008s2709 Capsella rubella HOM05D004032 ORTHO05D004462 1.4e-15 87.0 97 47.4
Lsat_1_v5_gn_2_83781 Lactuca sativa HOM05D004032 ORTHO05D004462 3.1e-15 85.9 171 41.5
CANSAT01G2482 Cannabis sativa HOM05D004032 ORTHO05D004462 1.3e-13 80.5 228 32.9
Sc16g0000080 Simmondsia chinensis HOM05D004032 ORTHO05D004462 2.9e-13 79.3 171 38.0
SGA_v2.0_scaffold72G24091 Striga asiatica HOM05D004032 ORTHO05D004462 3.7e-13 79.0 165 37.6
Hund16386 Selenicereus undatus HOM05D004032 ORTHO05D004462 8.3e-13 77.8 196 34.2
CDE02G2979 Ceratophyllum demersum HOM05D000039 ORTHO05D000870 2.7e-11 72.8 159 38.4
ClCG02G012390 Citrullus lanatus HOM05D004032 ORTHO05D004462 2.7e-11 72.8 93 44.1
MELO3C020862.2 Cucumis melo HOM05D004032 ORTHO05D004462 2.7e-11 72.8 93 46.2
HPP92_007856 Vanilla planifolia HOM05D004032 ORTHO05D004462 7.8e-11 71.2 145 35.2
Nitab4.5_0006689g0040 Nicotiana tabacum HOM05D004032 ORTHO05D004462 1.3e-10 70.5 96 45.8
MELO3C007617.2 Cucumis melo HOM05D004032 ORTHO05D004462 3.0e-10 69.3 180 33.9
arahy.Tifrunner.gnm1.ann1.NPYP4Z Arachis hypogaea HOM05D004032 ORTHO05D004462 5.1e-10 68.6 45 71.1
CsaV3_2G016520 Cucumis sativus L. HOM05D004032 ORTHO05D004462 6.6e-10 68.2 182 31.3
Os03g0442900 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 4.3e-09 65.5 198 30.3
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 5.6e-09 65.1 160 33.8
Os03g0762100 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 1.2e-08 63.9 82 43.9
Os12g0580600 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 1.6e-08 63.5 197 31.0
Os03g0604566 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 4.7e-08 62.0 77 45.5
Zm00001eb264720 Zea mays HOM05D036073 ORTHO05D004462 6.2e-08 61.6 161 33.5
EL10Ac6g15646 Beta vulgaris HOM05D004032 ORTHO05D004462 1.4e-07 60.5 41 68.3
Zm00001eb058240 Zea mays HOM05D004032 ORTHO05D004462 4.0e-07 58.9 47 57.4
Zm00001eb214280 Zea mays HOM05D004032 ORTHO05D004462 5.2e-07 58.5 47 57.4
Lsat_1_v5_gn_5_85601 Lactuca sativa HOM05D007665 ORTHO05D008293 4.4e-06 55.5 168 28.0
Zm00001eb134870 Zea mays HOM05D004032 ORTHO05D004462 7.6e-06 54.7 90 38.9
Sed0005334 Sechium edule HOM05D004032 ORTHO05D004462 9.9e-06 54.3 157 33.1


User provided reference genes

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