Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 4.7e-129 464.5 234 100.0
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 2.5e-90 335.9 228 74.6
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 6.6e-83 311.2 216 70.8
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 1.1e-82 310.5 229 66.4
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 1.9e-82 309.7 225 67.6
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 4.0e-80 302.0 225 66.2
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 5.8e-79 298.1 226 62.8
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 1.7e-78 296.6 234 64.5
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 2.9e-78 295.8 226 65.5
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 1.1e-77 293.9 227 62.6
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 3.2e-77 292.4 224 62.9
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 7.1e-77 291.2 223 64.1
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 1.2e-76 290.4 204 69.6
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 1.6e-76 290.0 227 61.7
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 1.6e-76 290.0 227 63.0
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 2.1e-76 289.7 207 68.1
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 2.1e-76 289.7 231 62.8
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 2.7e-76 289.3 224 65.6
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 6.0e-76 288.1 223 61.4
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 6.0e-76 288.1 223 61.9
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 6.7e-75 284.6 198 70.2
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 2.5e-74 282.7 224 65.2
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 1.6e-73 280.0 223 62.8
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 6.2e-73 278.1 223 60.5
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 8.1e-73 277.7 226 60.6
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 2.4e-72 276.2 199 69.3
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 9.0e-72 274.2 221 62.0
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 3.4e-71 272.3 222 61.3
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 1.3e-70 270.4 225 58.2
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 1.7e-70 270.0 221 60.6
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 3.8e-70 268.9 221 60.2
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 1.1e-69 267.3 205 68.8
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 4.2e-69 265.4 222 57.7
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 5.5e-69 265.0 227 59.9
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 5.5e-69 265.0 230 59.1
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 7.1e-69 264.6 221 60.2
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 1.2e-68 263.8 231 58.4
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 3.5e-68 262.3 235 57.0
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 1.0e-67 260.8 223 60.1
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 1.3e-67 260.4 231 58.4
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 3.9e-67 258.8 221 58.4
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 5.1e-67 258.5 231 57.6
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 1.1e-66 257.3 223 60.1
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.9e-66 256.5 225 59.6
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.6e-65 253.4 224 58.9
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 1.6e-65 253.4 223 58.7
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 2.1e-65 253.1 180 68.3
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 5.3e-64 248.4 210 59.5
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 9.0e-64 247.7 223 58.3
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 1.5e-63 246.9 170 70.0
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 1.7e-62 243.4 205 58.5
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 2.9e-62 242.7 235 54.9
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 4.9e-62 241.9 223 57.4
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 7.1e-61 238.0 223 55.2
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 2.3e-59 233.0 201 59.7
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 3.0e-59 232.6 227 54.6
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 5.7e-58 228.4 226 51.3
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 5.7e-58 228.4 178 63.5
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 5.7e-58 228.4 178 63.5
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 3.7e-57 225.7 206 51.9
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 3.1e-56 222.6 225 49.8
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 1.2e-55 220.7 204 54.9
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 1.0e-54 217.6 186 58.1
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 5.0e-54 215.3 205 55.6
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 3.3e-50 202.6 154 63.0
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 2.4e-48 196.4 132 72.0
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 1.7e-46 190.3 143 65.7
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 2.2e-46 189.9 225 47.1
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.9e-45 186.8 225 46.2
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.1e-42 177.6 114 75.4
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.2e-41 173.3 163 50.9
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.8e-40 170.2 144 58.3
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.2e-39 167.5 120 70.0
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.2e-39 167.5 120 70.0
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 1.2e-39 167.5 171 53.2
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 7.9e-36 154.8 126 63.5
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.4e-35 154.1 115 64.3
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 3.9e-35 152.5 227 43.6
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.1e-34 151.0 114 63.2
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.1e-34 151.0 114 63.2
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 1.7e-33 147.1 113 61.9
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 8.2e-33 144.8 111 61.3
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.6e-31 139.8 135 53.3
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 1.7e-30 137.1 119 56.3
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 3.8e-30 136.0 109 61.5
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 1.9e-29 133.7 131 57.3
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 1.2e-28 131.0 136 53.7
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 2.7e-28 129.8 115 53.0
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 3.6e-28 129.4 120 55.0
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.4e-27 127.5 135 50.4
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 8.8e-27 124.8 100 61.0
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 1.4e-24 117.5 71 78.9
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 4.1e-24 115.9 184 31.5
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 2.7e-23 113.2 227 28.6
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.7e-23 113.2 88 61.4
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.8e-19 100.5 64 70.3
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 1.8e-19 100.5 73 61.6
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 1.5e-18 97.4 102 48.0
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 4.4e-18 95.9 74 62.2
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 2.8e-17 93.2 74 59.5
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 5.4e-16 89.0 101 44.6
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.6e-15 87.4 91 45.1
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 8.3e-09 65.1 81 43.2


User provided reference genes

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