Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 8.0e-171 603.6 290 100.0
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 6.4e-160 567.4 290 92.8
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 6.6e-149 530.8 290 85.9
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.6e-147 526.2 290 85.5
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 8.1e-147 523.9 287 85.4
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 8.9e-146 520.4 295 84.1
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 2.0e-145 519.2 290 82.8
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 7.6e-145 517.3 282 86.2
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 2.9e-144 515.4 290 81.4
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 3.7e-144 515.0 286 82.9
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 1.1e-143 513.5 281 84.7
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.4e-143 512.3 286 82.9
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 3.2e-143 511.9 286 82.9
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 5.4e-143 511.1 293 81.9
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 9.2e-143 510.4 286 82.2
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.2e-142 510.0 284 82.7
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.6e-142 509.6 287 84.0
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.6e-142 509.6 282 83.7
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 1.6e-142 509.6 287 81.9
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 3.5e-142 508.4 292 81.8
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 4.6e-142 508.1 285 82.5
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 7.8e-142 507.3 281 84.0
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.3e-141 506.5 323 76.5
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.7e-141 506.1 291 81.1
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 3.9e-141 505.0 290 79.7
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 5.1e-141 504.6 281 84.3
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 8.6e-141 503.8 290 81.0
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 7.3e-140 500.7 285 82.8
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 1.2e-139 500.0 283 82.3
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.8e-139 498.8 278 83.5
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 2.8e-139 498.8 278 83.5
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.1e-138 496.9 278 83.5
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 2.4e-138 495.7 295 80.0
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 3.1e-138 495.4 285 80.0
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 5.2e-138 494.6 287 79.8
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 8.9e-138 493.8 295 79.7
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 3.4e-137 491.9 286 78.3
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 4.4e-137 491.5 285 80.7
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 7.6e-137 490.7 281 81.9
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 1.3e-136 490.0 284 80.6
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 2.2e-136 489.2 313 75.1
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 2.9e-136 488.8 273 83.2
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 2.9e-136 488.8 280 78.9
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 4.9e-136 488.0 273 83.2
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 6.4e-136 487.6 285 79.3
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 8.4e-136 487.3 282 80.5
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.4e-135 486.5 273 82.8
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.4e-135 486.5 285 79.3
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 1.4e-135 486.5 282 80.1
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.4e-135 486.5 265 85.3
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 3.2e-135 485.3 282 81.6
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 5.4e-135 484.6 286 78.0
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 5.4e-135 484.6 282 78.4
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 1.2e-134 483.4 302 77.2
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 3.5e-134 481.9 282 78.0
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 4.6e-134 481.5 282 80.5
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 1.0e-133 480.3 283 78.4
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 1.3e-133 479.9 272 81.2
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 1.3e-133 479.9 280 78.2
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 1.7e-133 479.6 273 82.1
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 1.7e-133 479.6 288 79.2
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 2.3e-133 479.2 281 78.3
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 3.9e-133 478.4 276 81.2
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 3.9e-133 478.4 288 78.5
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 6.6e-133 477.6 288 77.8
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 1.1e-132 476.9 282 77.0
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 2.5e-132 475.7 273 81.0
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 2.5e-132 475.7 276 77.2
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 2.5e-132 475.7 282 79.8
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 3.3e-132 475.3 276 81.2
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 7.3e-132 474.2 282 76.6
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 9.6e-132 473.8 271 78.6
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 1.6e-131 473.0 278 76.6
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 2.1e-131 472.6 273 79.9
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 3.6e-131 471.9 275 80.7
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.4e-130 469.9 290 77.9
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 1.8e-130 469.5 281 79.0
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.8e-130 469.5 328 69.5
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.4e-130 469.2 288 76.0
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 3.1e-130 468.8 280 78.9
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 6.9e-130 467.6 286 77.3
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 6.9e-130 467.6 274 79.2
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.5e-129 466.5 281 80.1
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 9.9e-129 463.8 275 78.5
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 6.4e-128 461.1 304 73.7
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 2.4e-127 459.1 285 78.6
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 1.2e-126 456.8 284 76.8
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 1.2e-126 456.8 275 78.2
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.6e-126 454.9 325 68.3
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.0e-125 453.8 282 75.9
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 1.7e-125 453.0 282 76.2
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.5e-124 449.9 276 76.8
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 2.5e-124 449.1 273 76.6
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 3.3e-124 448.7 301 72.1
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 7.4e-124 447.6 273 76.2
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 4.8e-123 444.9 292 74.3
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 2.6e-121 439.1 282 72.0
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 3.4e-121 438.7 274 75.5
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 4.9e-120 434.9 282 73.0
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.2e-118 430.3 316 67.1
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 1.2e-118 430.3 270 72.6
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 6.0e-118 427.9 242 82.6
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 6.0e-118 427.9 367 60.2
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 3.0e-117 425.6 279 72.0
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 8.7e-117 424.1 277 72.6
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 5.8e-113 411.4 279 70.3
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.5e-111 406.0 241 79.7
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 2.3e-109 399.4 223 83.0
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 5.1e-109 398.3 221 83.7
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 5.0e-104 381.7 291 67.4
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 3.2e-103 379.0 199 88.9
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.1e-102 376.3 274 65.7
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.3e-99 367.1 197 84.8
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 1.3e-99 367.1 210 81.0
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.4e-97 359.0 275 58.5
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 8.8e-93 344.4 276 58.0
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 3.1e-90 335.9 291 55.7
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 6.5e-88 328.2 223 69.1
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 5.5e-87 325.1 189 80.4
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 5.5e-87 325.1 189 80.4
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.8e-82 310.1 229 68.6
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 1.7e-75 287.0 228 59.2
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.8e-74 283.5 306 52.3
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 3.1e-74 282.7 271 51.3
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.2e-65 254.2 156 78.2
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 4.5e-65 252.3 155 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 5.9e-65 251.9 183 63.4
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.6e-57 227.3 131 80.2
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.6e-57 227.3 210 50.0
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 7.8e-57 224.9 263 47.5
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 3.9e-48 196.1 191 51.3
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.9e-39 167.2 106 72.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 3.3e-39 166.4 272 38.2
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 9.5e-39 164.9 211 40.3
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 1.6e-30 137.5 113 59.3
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 1.5e-28 131.0 85 70.6
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 3.0e-16 90.1 72 59.7
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 6.9e-13 79.0 39 87.2
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 7.6e-12 75.5 45 71.1


User provided reference genes

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