Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 3.3e-124 448.4 221 100.0
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 3.6e-107 391.7 224 86.6
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.2e-105 386.7 225 84.9
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.9e-104 382.1 224 86.2
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.9e-103 379.4 224 83.5
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.3e-103 377.1 224 82.6
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.6e-102 376.3 228 83.8
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.1e-102 375.9 224 83.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.1e-102 375.9 224 83.0
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 4.6e-102 374.8 224 82.1
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 4.6e-102 374.8 224 82.1
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.3e-101 373.2 222 83.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 8.7e-101 370.5 226 81.4
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 8.7e-101 370.5 225 81.8
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.5e-100 369.8 227 81.9
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 1.5e-100 369.8 230 80.4
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 4.3e-100 368.2 227 81.1
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 7.4e-100 367.5 226 80.5
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 7.4e-100 367.5 227 81.5
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 9.6e-100 367.1 223 80.7
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 9.6e-100 367.1 230 80.4
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.3e-99 366.7 228 80.7
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.3e-99 366.7 227 81.1
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 2.1e-99 365.9 225 81.3
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.1e-98 363.6 224 81.2
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 1.4e-98 363.2 225 80.4
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.2e-97 360.1 247 74.5
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 2.0e-97 359.4 223 78.9
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.6e-97 359.0 224 80.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 2.6e-97 359.0 227 79.7
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.8e-97 357.8 222 80.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.3e-96 356.7 225 78.7
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 2.2e-96 355.9 224 78.6
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 2.9e-96 355.5 226 78.8
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 2.9e-96 355.5 221 79.2
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 2.9e-96 355.5 224 79.5
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.8e-96 355.1 225 76.9
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 3.8e-96 355.1 225 78.2
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 3.8e-96 355.1 219 79.5
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.5e-96 354.4 226 78.3
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.4e-95 353.2 223 78.0
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.9e-95 352.8 226 77.9
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.9e-95 352.8 223 76.2
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 3.2e-95 352.1 222 77.0
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 4.2e-95 351.7 225 78.7
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 4.2e-95 351.7 221 78.3
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 7.1e-95 350.9 223 77.1
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 9.3e-95 350.5 220 77.7
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 9.3e-95 350.5 223 76.2
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 9.3e-95 350.5 223 76.2
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.2e-94 350.1 221 76.9
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.2e-94 350.1 222 78.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 2.7e-94 349.0 221 76.5
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 2.7e-94 349.0 221 76.5
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 3.5e-94 348.6 228 75.4
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.5e-94 348.6 221 76.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.5e-94 348.6 221 76.0
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.0e-93 347.1 219 75.8
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 1.3e-93 346.7 221 77.4
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 2.3e-93 345.9 224 75.9
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.3e-93 345.9 226 77.4
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 6.7e-93 344.4 224 75.9
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 1.1e-92 343.6 231 74.5
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.5e-92 343.2 224 76.8
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 3.3e-92 342.0 224 74.1
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.6e-91 339.7 233 73.4
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.1e-91 339.3 210 81.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.8e-91 339.0 236 72.5
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 2.8e-91 339.0 219 75.3
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 2.8e-91 339.0 229 76.0
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 3.7e-91 338.6 246 69.9
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 6.3e-91 337.8 259 66.4
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.1e-90 337.0 245 71.4
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.4e-90 335.9 220 75.9
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 5.3e-90 334.7 226 72.1
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 9.0e-90 334.0 209 78.5
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.0e-89 332.8 224 75.0
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.4e-89 332.0 223 71.3
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.0e-88 330.5 203 81.3
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.3e-88 330.1 206 78.6
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.1e-87 327.0 223 75.3
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 3.2e-87 325.5 204 77.0
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.6e-86 323.2 232 69.4
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 2.7e-86 322.4 207 74.4
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 3.0e-85 318.9 214 73.4
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 3.3e-84 315.5 206 75.2
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 5.7e-84 314.7 226 69.9
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 4.8e-83 311.6 224 72.3
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 8.2e-83 310.8 210 72.9
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.4e-82 309.3 228 71.5
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 8.5e-80 300.8 217 68.2
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.1e-79 300.4 230 67.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.4e-77 293.5 239 62.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 1.5e-76 290.0 207 72.9
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 2.6e-73 279.3 152 86.8
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.9e-72 275.8 232 61.2
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 3.2e-71 272.3 170 77.6
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.0e-69 267.3 174 70.7
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 3.0e-69 265.8 175 72.0
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 8.8e-69 264.2 225 62.7
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.8e-66 256.5 206 66.0
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 7.0e-66 254.6 328 48.5
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 1.6e-65 253.4 226 59.3
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 5.0e-64 248.4 225 58.7
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.5e-63 245.0 147 77.6
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 3.0e-61 239.2 219 58.4
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 9.7e-60 234.2 152 74.3
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 3.7e-59 232.3 125 85.6
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 3.1e-58 229.2 161 64.6
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 4.5e-57 225.3 145 78.6
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 3.4e-52 209.1 132 68.9
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.2e-44 184.1 176 52.8
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.2e-41 174.1 134 63.4
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 5.2e-37 158.7 159 47.2
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.4e-28 129.0 63 92.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 7.0e-26 121.7 63 82.5
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 6.0e-25 118.6 86 61.6
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.0e-24 117.9 89 69.7
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.3e-24 117.5 68 85.3
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 4.7e-22 109.0 142 45.8
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-18 97.8 118 46.6


User provided reference genes

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