Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0888 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.7e-76 289.3 147 100.0
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 5.7e-16 88.2 153 37.3
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 5.7e-16 88.2 153 37.3
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 5.4e-14 81.6 150 34.7
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 9.2e-14 80.9 139 36.0
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 6.6e-12 74.7 141 31.9
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.2e-10 70.5 146 33.6
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 3.6e-10 68.9 145 33.8
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 6.1e-10 68.2 155 34.8
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 8.0e-10 67.8 154 33.8
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 1.8e-09 66.6 151 33.8
Sabra02G0106400 Salix brachista HOM05D006536 ORTHO05D005877 5.2e-09 65.1 124 33.1
Manes.03G123318 Manihot esculenta HOM05D006536 ORTHO05D005877 1.2e-08 63.9 143 25.9
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 1.5e-08 63.5 130 32.3
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 2.0e-08 63.2 108 35.2
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 2.6e-08 62.8 111 33.3
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 3.4e-08 62.4 125 30.4
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 5.8e-08 61.6 144 26.4
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 7.5e-08 61.2 145 32.4
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.3e-07 60.5 135 32.6
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 2.2e-07 59.7 138 33.3
TWI38G1444 Tripterygium wilfordii HOM05D055978 ORTHO05D413837 2.2e-07 59.7 148 31.8
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 2.9e-07 59.3 102 31.4
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.9e-07 59.3 140 30.7
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 3.7e-07 58.9 139 28.1
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.7e-07 58.9 145 26.2
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.7e-07 58.9 139 33.1
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 4.9e-07 58.5 144 33.3
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 8.3e-07 57.8 150 30.0
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.1e-06 57.4 143 30.8
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 1.4e-06 57.0 93 34.4
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 1.9e-06 56.6 112 31.2
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.9e-06 56.6 140 28.6
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.9e-06 56.6 139 29.5
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 2.4e-06 56.2 149 26.2
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 2.4e-06 56.2 133 31.6
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 3.2e-06 55.8 93 34.4
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 3.2e-06 55.8 133 30.8
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 3.2e-06 55.8 130 30.0
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 4.1e-06 55.5 150 30.0
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.0e-06 54.7 138 32.6
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 9.2e-06 54.3 141 27.7
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 9.2e-06 54.3 146 26.7
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 9.2e-06 54.3 112 33.0


User provided reference genes

Program Settings