Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 3.0e-205 718.4 385 100.0
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 7.9e-174 614.0 389 86.1
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 8.7e-165 583.9 382 78.0
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 5.7e-164 581.3 380 78.4
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.3e-163 580.1 380 78.2
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.1e-162 577.0 382 79.6
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 4.5e-161 571.6 381 79.8
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.7e-160 569.7 379 83.6
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 2.7e-158 562.4 387 76.5
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.3e-157 560.1 390 74.1
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.0e-157 558.9 389 81.0
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 3.9e-157 558.5 390 74.1
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 7.4e-156 554.3 389 75.3
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.2e-155 552.7 395 77.5
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.9e-151 539.7 384 79.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.5e-151 539.3 410 76.3
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 2.5e-151 539.3 389 79.2
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 3.2e-151 538.9 389 79.4
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 3.2e-151 538.9 386 79.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 3.2e-151 538.9 393 78.6
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.2e-150 537.0 377 76.1
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.2e-150 537.0 387 73.9
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.1e-150 536.2 382 80.4
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 2.7e-150 535.8 404 74.0
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.8e-149 533.1 391 78.8
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.8e-149 533.1 382 78.0
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 2.3e-149 532.7 413 73.8
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 3.0e-149 532.3 393 73.0
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 3.9e-149 531.9 405 70.4
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 6.7e-149 531.2 379 79.4
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 8.8e-149 530.8 389 78.1
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 8.8e-149 530.8 402 77.9
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.3e-148 528.9 399 75.9
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 7.4e-148 527.7 425 73.2
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 7.4e-148 527.7 374 79.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 9.7e-148 527.3 366 81.4
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.1e-146 523.9 395 77.7
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 9.1e-146 520.8 423 65.0
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 2.0e-145 519.6 399 77.4
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.8e-144 515.4 398 68.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 5.5e-143 511.5 414 73.7
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 9.4e-143 510.8 404 66.6
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.6e-142 510.0 397 75.3
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 6.1e-142 508.1 377 76.9
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 7.9e-142 507.7 403 68.0
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.8e-141 506.5 422 67.8
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.1e-140 503.8 395 66.8
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.0e-140 503.1 400 75.2
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 2.6e-140 502.7 375 72.8
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.3e-140 502.3 408 67.2
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.7e-139 498.8 394 70.3
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.1e-138 495.4 410 67.6
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 4.1e-138 495.4 411 67.9
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.6e-137 492.7 415 67.0
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.7e-136 490.0 406 67.5
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.9e-136 489.2 402 71.1
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 6.5e-136 488.0 402 73.6
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-135 487.3 413 66.8
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 7.2e-135 484.6 391 70.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 6.1e-134 481.5 392 70.4
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 5.2e-133 478.4 383 64.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 8.8e-133 477.6 383 64.8
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.3e-131 473.8 364 77.7
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 1.8e-130 469.9 408 67.9
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.1e-130 469.2 353 68.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 4.1e-130 468.8 391 65.2
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 7.0e-130 468.0 430 65.3
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.2e-129 467.2 385 64.7
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 2.7e-129 466.1 417 64.5
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.5e-129 465.3 378 70.6
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-128 464.2 400 65.5
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.0e-128 464.2 353 74.8
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.5e-127 460.3 399 65.4
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 3.2e-127 459.1 396 68.9
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 5.5e-127 458.4 404 64.9
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 5.5e-127 458.4 404 64.9
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 7.2e-127 458.0 400 67.8
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.6e-126 456.8 410 61.0
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.1e-126 456.4 411 64.7
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.1e-126 456.4 411 64.7
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.7e-126 456.1 399 64.2
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 8.0e-126 454.5 409 66.3
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-125 454.1 407 67.8
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.4e-125 453.8 381 71.1
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 3.0e-125 452.6 404 67.3
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 4.0e-125 452.2 412 62.6
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 7.5e-124 448.0 412 66.7
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.3e-123 447.2 403 67.5
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.3e-123 447.2 403 67.5
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.3e-123 447.2 342 68.1
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 4.8e-123 445.3 358 72.3
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.8e-122 443.4 408 65.7
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 4.1e-122 442.2 416 66.1
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 7.0e-122 441.4 407 66.8
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 2.3e-120 436.4 304 75.7
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.9e-120 436.0 501 51.5
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 5.0e-120 435.3 422 63.7
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.1e-119 434.1 292 83.9
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 1.9e-119 433.3 323 71.8
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 3.2e-119 432.6 331 70.4
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.2e-118 430.6 398 68.1
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 6.1e-118 428.3 398 65.8
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.0e-117 427.6 398 65.8
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.4e-117 427.2 330 72.1
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.0e-116 423.3 399 65.2
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 2.6e-116 422.9 474 55.9
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.4e-116 422.5 399 64.9
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.4e-116 422.2 366 69.7
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.7e-115 420.2 374 64.7
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.4e-114 416.4 367 63.2
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-113 412.5 397 61.0
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.6e-112 408.3 415 59.0
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 2.3e-109 399.8 385 57.9
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 7.5e-108 394.8 344 61.0
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.1e-98 362.5 422 52.1
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.0e-97 360.1 391 52.9
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.9e-95 353.6 342 57.9
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 3.3e-95 352.8 353 61.2
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.1e-93 347.8 382 52.6
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.7e-91 340.5 380 58.2
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.7e-89 333.2 348 50.3
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 6.2e-86 322.0 341 50.1
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 5.2e-85 318.9 167 88.6
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 6.4e-83 312.0 325 51.7
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.1e-81 307.0 161 85.7
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 7.8e-81 305.1 363 49.6
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.5e-79 300.8 298 52.3
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 3.1e-77 293.1 278 70.1
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 9.9e-76 288.1 282 69.5
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 2.7e-73 280.0 290 61.0
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 4.6e-73 279.3 266 62.8
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 8.4e-67 258.5 131 90.8
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 2.1e-57 227.3 126 84.1
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.3e-54 218.0 113 87.6
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 9.0e-53 211.8 155 74.2
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.0e-49 199.1 251 57.8
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 5.7e-47 192.6 318 38.1
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 7.4e-47 192.2 113 73.5
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 3.8e-43 179.9 91 87.9
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.6e-36 157.1 154 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.4e-32 144.8 266 38.0
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 8.5e-27 125.6 100 64.0
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 3.6e-17 93.6 107 50.5
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 7.5e-15 85.9 83 47.0
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 2.0e-07 61.2 61 50.8
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 9.8e-07 58.9 74 43.2


User provided reference genes

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