Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.1e-126 455.3 255 100.0
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.1e-126 455.3 255 100.0
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 6.3e-79 298.1 265 64.9
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.4e-78 296.2 269 65.4
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 5.0e-76 288.5 270 65.2
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.6e-76 288.1 262 67.9
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.5e-75 286.2 262 66.8
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 4.2e-75 285.4 266 69.9
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.6e-74 283.5 270 64.1
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.6e-74 283.5 264 67.0
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 6.8e-73 278.1 262 69.1
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 8.9e-73 277.7 267 64.8
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.2e-72 277.3 264 61.4
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.5e-72 276.9 267 59.9
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 4.4e-72 275.4 262 65.3
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 5.7e-72 275.0 230 70.4
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 2.2e-71 273.1 192 74.0
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.8e-70 270.0 262 64.9
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 1.8e-70 270.0 270 61.1
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 4.1e-70 268.9 271 57.2
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 5.4e-70 268.5 271 63.5
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 5.4e-70 268.5 265 62.3
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 7.0e-70 268.1 264 58.0
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 7.0e-70 268.1 277 63.9
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.6e-69 266.9 157 83.4
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 2.0e-69 266.5 274 60.9
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 3.5e-69 265.8 194 72.2
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 7.8e-69 264.6 284 57.0
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.0e-68 264.2 231 68.0
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 1.7e-68 263.5 196 69.4
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 5.0e-68 261.9 261 58.2
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 8.6e-68 261.2 239 59.8
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.1e-67 260.8 268 63.1
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 3.3e-67 259.2 269 55.4
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 4.3e-67 258.8 278 56.5
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 4.3e-67 258.8 263 57.8
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 7.3e-67 258.1 276 56.5
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 1.2e-66 257.3 273 59.3
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.2e-66 257.3 263 57.8
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 2.1e-66 256.5 271 63.1
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 2.8e-66 256.1 258 65.9
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 3.6e-66 255.8 195 66.7
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.1e-66 255.0 187 69.5
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.1e-66 255.0 187 69.5
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 6.1e-66 255.0 187 69.5
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 8.0e-66 254.6 271 58.7
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 8.0e-66 254.6 270 61.9
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 1.8e-65 253.4 193 67.9
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 3.1e-65 252.7 279 56.3
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 6.8e-65 251.5 259 61.0
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.5e-64 250.4 188 68.1
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 2.6e-64 249.6 297 56.9
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 5.8e-64 248.4 248 58.1
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.3e-63 247.3 185 68.1
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.7e-63 246.9 188 66.5
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 2.2e-63 246.5 229 63.3
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 2.9e-63 246.1 255 61.2
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 3.7e-63 245.7 202 64.9
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 3.7e-63 245.7 260 54.6
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 3.2e-62 242.7 178 70.8
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 3.2e-62 242.7 245 59.6
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 3.2e-62 242.7 185 66.5
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 3.2e-62 242.7 188 66.5
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 4.1e-62 242.3 152 77.6
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 4.1e-62 242.3 152 77.6
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 5.4e-62 241.9 169 72.2
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 7.0e-62 241.5 261 55.2
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 2.0e-61 240.0 261 52.9
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 3.5e-61 239.2 270 59.6
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 4.6e-61 238.8 152 77.0
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 4.6e-61 238.8 269 56.5
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 6.0e-61 238.4 232 64.7
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 6.0e-61 238.4 193 63.7
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.0e-60 237.7 257 56.0
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.7e-60 236.9 271 54.6
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 2.3e-60 236.5 224 62.9
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 3.0e-60 236.1 186 64.5
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 3.9e-60 235.7 188 64.4
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.1e-59 234.2 255 58.0
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 2.5e-59 233.0 259 57.5
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 2.5e-59 233.0 193 61.7
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 3.3e-59 232.6 194 60.3
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 3.3e-59 232.6 258 57.4
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 4.3e-59 232.3 191 62.3
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 5.6e-59 231.9 259 57.1
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 7.3e-59 231.5 259 56.4
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 7.3e-59 231.5 259 56.4
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 7.3e-59 231.5 259 56.4
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 7.3e-59 231.5 260 53.8
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 1.6e-58 230.3 264 57.2
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 2.8e-58 229.6 193 59.6
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 1.1e-57 227.6 193 62.7
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 1.1e-57 227.6 243 60.1
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.1e-57 227.6 170 70.0
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.3e-57 226.5 277 56.3
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 3.1e-57 226.1 191 62.8
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 4.0e-57 225.7 191 63.4
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 5.2e-57 225.3 191 62.8
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 5.2e-57 225.3 210 58.6
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 6.8e-57 224.9 191 63.4
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 4.4e-56 222.2 188 62.8
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 5.8e-56 221.9 222 57.2
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 7.5e-56 221.5 189 58.7
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 3.7e-55 219.2 190 60.5
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 8.3e-55 218.0 190 60.5
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 1.2e-53 214.2 242 50.4
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.9e-51 206.8 273 46.5
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 7.3e-51 204.9 151 66.2
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 3.5e-45 186.0 165 55.8
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 1.6e-42 177.2 174 52.3
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 2.1e-42 176.8 155 56.8
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 1.1e-41 174.5 240 45.8
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.4e-41 174.1 152 57.9
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.2e-40 171.0 152 57.2
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 3.4e-40 169.5 268 50.4
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 4.9e-39 165.6 137 60.6
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.1e-38 164.5 166 49.4
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 4.8e-34 149.1 160 46.9
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.4e-30 137.5 173 43.4
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 1.6e-29 134.0 169 42.6
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 4.6e-29 132.5 113 62.8
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 3.5e-21 106.3 110 58.2


User provided reference genes

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