Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 4.0e-159 564.7 281 100.0
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 5.0e-93 345.1 204 83.3
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 1.8e-90 336.7 200 80.5
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 5.2e-90 335.1 199 82.4
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.1e-89 334.0 199 83.9
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 2.0e-89 333.2 200 80.0
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.4e-87 327.0 197 80.7
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 3.5e-86 322.4 204 79.4
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.0e-85 320.9 204 76.5
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.0e-85 320.9 202 78.7
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.3e-85 320.5 202 79.7
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.3e-85 320.5 202 79.7
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.7e-85 320.1 202 79.7
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.2e-85 319.7 202 79.2
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 2.2e-85 319.7 203 77.3
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 3.8e-85 318.9 200 76.5
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 6.5e-85 318.2 194 78.4
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 6.5e-85 318.2 202 78.7
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.9e-84 316.6 197 78.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 3.2e-84 315.8 197 77.7
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 5.5e-84 315.1 198 79.8
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 5.5e-84 315.1 203 77.8
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 9.4e-84 314.3 198 77.8
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.2e-83 313.9 204 79.4
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.6e-83 313.5 204 78.9
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 2.7e-83 312.8 203 74.9
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 6.1e-83 311.6 205 77.6
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.0e-83 311.2 202 77.7
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 8.0e-83 311.2 202 74.8
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 8.0e-83 311.2 204 77.9
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 8.0e-83 311.2 197 78.2
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.0e-82 310.8 204 78.4
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 4.0e-82 308.9 197 77.7
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.2e-81 307.4 197 76.6
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.5e-81 307.0 206 74.3
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 2.0e-81 306.6 197 75.1
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 5.7e-81 305.1 203 73.4
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 4.8e-80 302.0 204 72.1
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 6.3e-80 301.6 197 77.2
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 8.2e-80 301.2 197 74.1
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.4e-79 300.4 198 74.7
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.8e-79 300.1 202 76.2
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 2.4e-79 299.7 197 73.6
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 2.4e-79 299.7 203 71.4
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 5.3e-79 298.5 197 73.6
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 5.3e-79 298.5 197 73.6
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 5.3e-79 298.5 198 73.2
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.6e-78 297.0 198 73.7
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 7.7e-78 294.7 197 73.1
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 5.0e-77 292.0 200 74.0
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 6.5e-77 291.6 201 70.1
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 1.9e-76 290.0 198 70.7
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 9.4e-76 287.7 197 74.6
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 9.4e-76 287.7 205 70.2
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.2e-75 287.3 199 75.4
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 3.6e-75 285.8 201 69.2
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 3.6e-75 285.8 199 73.9
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.3e-74 283.1 204 69.6
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.0e-74 282.7 194 72.2
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 3.0e-74 282.7 197 73.1
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 7.5e-73 278.1 200 70.0
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 7.5e-73 278.1 201 69.7
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.3e-72 277.3 194 70.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.3e-72 277.3 203 71.4
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 1.7e-72 276.9 202 69.3
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 2.2e-72 276.6 204 69.1
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 5.4e-71 271.9 199 68.8
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 9.1e-71 271.2 194 71.6
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.2e-70 270.8 199 69.3
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 1.2e-70 270.8 197 70.1
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 1.6e-70 270.4 203 66.0
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 2.0e-70 270.0 194 71.6
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 2.7e-70 269.6 203 65.0
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 1.3e-69 267.3 203 68.0
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 2.9e-69 266.2 205 67.8
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 4.2e-68 262.3 201 67.2
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 9.5e-68 261.2 202 66.3
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.2e-67 260.8 196 65.8
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.2e-67 260.8 203 66.5
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 2.8e-67 259.6 198 65.7
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.0e-66 257.7 194 68.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 6.8e-66 255.0 184 70.1
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 1.3e-64 250.8 215 60.9
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 2.2e-64 250.0 202 64.9
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 3.1e-63 246.1 194 67.5
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 3.1e-63 246.1 197 61.9
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 4.1e-63 245.7 214 61.2
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 5.4e-63 245.4 194 64.9
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.8e-61 239.2 202 63.4
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.3e-60 235.0 188 64.4
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 2.1e-59 233.4 203 58.6
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.3e-56 224.2 202 58.9
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.4e-55 220.7 143 76.2
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 1.0e-53 214.5 204 57.4
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 1.3e-53 214.2 182 61.0
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 2.3e-53 213.4 199 57.3
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 8.0e-51 204.9 183 59.6
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 8.1e-43 178.3 154 62.3
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 3.1e-42 176.4 146 61.0
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 5.2e-42 175.6 193 50.3
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 6.8e-42 175.3 136 66.2
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 4.1e-39 166.0 210 43.8
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 1.5e-36 157.5 170 54.1
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 1.6e-30 137.5 92 71.7
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 5.8e-25 119.0 86 67.4
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.5e-20 104.4 172 37.8
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 4.0e-18 96.3 313 27.5
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 2.6e-17 93.6 60 78.3
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 5.8e-17 92.4 66 66.7
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 2.2e-16 90.5 66 65.2
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 1.9e-15 87.4 208 37.0
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.2e-14 84.7 75 56.0
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 4.6e-14 82.8 48 75.0
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.0e-13 81.6 74 56.8
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.0e-13 81.6 74 56.8
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.0e-13 81.6 74 56.8
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 6.7e-13 79.0 74 55.4
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.7e-13 78.6 74 55.4
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.1e-12 78.2 74 55.4
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.5e-12 77.0 74 54.1
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 3.7e-11 73.2 104 47.1
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 1.9e-07 60.8 50 60.0
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 1.9e-07 60.8 50 60.0


User provided reference genes

Program Settings