Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0104 Tripterygium wilfordii HOM05D011069 ORTHO05D010624 3.2e-87 325.1 171 100.0
Nitab4.5_0000687g0270 Nicotiana tabacum HOM05D009845 ORTHO05D010624 4.5e-12 75.5 62 58.1
Nitab4.5_0004100g0090 Nicotiana tabacum HOM05D009808 ORTHO05D006814 5.8e-12 75.1 62 59.7
Lalb_Chr00c24g0406721 Lupinus albus HOM05D005794 ORTHO05D006814 1.3e-11 73.9 48 70.8
TWI12G1211 Tripterygium wilfordii HOM05D025976 ORTHO05D010624 2.2e-11 73.2 132 43.2
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 1.1e-10 70.9 48 66.7
CANSAT16G0049 Cannabis sativa HOM05D009845 ORTHO05D010624 1.1e-10 70.9 51 62.7
SHI15111 Sapria himalayana HOM05D005794 ORTHO05D006814 1.4e-10 70.5 48 66.7
MSTRG.25414 Avicennia marina HOM05D009845 ORTHO05D010624 4.2e-10 68.9 48 66.7
SHI35300 Sapria himalayana HOM05D005794 ORTHO05D006814 4.2e-10 68.9 48 66.7
SHI37163 Sapria himalayana HOM05D005794 ORTHO05D006814 4.2e-10 68.9 48 66.7
SHI44549 Sapria himalayana HOM05D005794 ORTHO05D006814 4.2e-10 68.9 48 66.7
SHI48376 Sapria himalayana HOM05D005794 ORTHO05D006814 4.2e-10 68.9 48 66.7
BcaC02g12523 Brassica carinata HOM05D011069 ORTHO05D010624 7.1e-10 68.2 134 38.8
SHI50742 Sapria himalayana HOM05D005794 ORTHO05D006814 1.2e-09 67.4 48 64.6
BcaC01g05061 Brassica carinata HOM05D011069 ORTHO05D010624 2.1e-09 66.6 72 48.6
C03p30640 Brassica napus HOM05D011069 ORTHO05D010624 2.1e-09 66.6 72 48.6
Oeu033677.1 Olea europaea HOM05D009845 ORTHO05D010624 2.1e-09 66.6 48 64.6
Medtr3g078610 Medicago truncatula HOM05D009845 ORTHO05D010624 2.7e-09 66.2 47 66.0
TPR.G6905 Trifolium pratense HOM05D009845 ORTHO05D010624 2.7e-09 66.2 47 63.8
TWI12G1418 Tripterygium wilfordii HOM05D025976 ORTHO05D413740 2.7e-09 66.2 100 47.0
TPR.G11219 Trifolium pratense HOM05D009845 ORTHO05D010624 3.5e-09 65.9 47 61.7
TWI12G0247 Tripterygium wilfordii HOM05D025976 ORTHO05D010624 4.6e-09 65.5 85 49.4
A05p01300 Brassica napus HOM05D011069 ORTHO05D010624 6.1e-09 65.1 134 36.6
Carub.0004s2920 Capsella rubella HOM05D011069 ORTHO05D010624 6.1e-09 65.1 73 46.6
Thhalv10001774m.g Eutrema salsugineum HOM05D011069 ORTHO05D010624 6.1e-09 65.1 86 44.2
HanXRQChr01g0004171 Helianthus annuus HOM05D029082 ORTHO05D010624 6.1e-09 65.1 46 63.0
ECA248G2152 Erigeron canadensis HOM05D029082 ORTHO05D010624 7.9e-09 64.7 46 60.9
HanXRQChr16g0506281 Helianthus annuus HOM05D029082 ORTHO05D010624 7.9e-09 64.7 46 60.9
Lsat_1_v5_gn_1_129701 Lactuca sativa HOM05D009845 ORTHO05D010624 7.9e-09 64.7 46 60.9
Psat5g113560 Pisum sativum HOM05D009845 ORTHO05D010624 7.9e-09 64.7 47 63.8
Ah.01g013130 Amaranthus hybridus HOM05D007797 ORTHO05D009741 1.0e-08 64.3 62 51.6
A03p25700 Brassica napus HOM05D011069 ORTHO05D010624 1.0e-08 64.3 135 36.3
BolC3t15414H Brassica oleracea HOM05D011069 ORTHO05D010624 1.0e-08 64.3 111 36.0
BraA03t11784Z Brassica rapa HOM05D011069 ORTHO05D010624 1.0e-08 64.3 135 36.3
BraA05t19128Z Brassica rapa HOM05D011069 ORTHO05D010624 1.0e-08 64.3 135 36.3
Ca_16215_v3 Cicer arietinum L. HOM05D009845 ORTHO05D010624 2.3e-08 63.2 47 59.6
Lj1g0026374 Lotus japonicus HOM05D009845 ORTHO05D010624 2.3e-08 63.2 50 60.0
BcaNung05601 Brassica carinata HOM05D011069 ORTHO05D010624 3.0e-08 62.8 61 50.8
Nitab4.5_0002326g0060 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.0e-08 62.8 48 60.4
Potri.004G049600 Populus trichocarpa HOM05D009845 ORTHO05D010624 3.9e-08 62.4 40 72.5
SHI20512 Sapria himalayana HOM05D009845 ORTHO05D010624 3.9e-08 62.4 48 60.4
BcaB01g03211 Brassica carinata HOM05D011069 ORTHO05D010624 5.1e-08 62.0 146 33.6
Sp4g28540 Schrenkiella parvula HOM05D011069 ORTHO05D010624 5.1e-08 62.0 139 34.5
CARHR141830 Cardamine hirsuta HOM05D011069 ORTHO05D010624 6.7e-08 61.6 84 40.5
arahy.Tifrunner.gnm1.ann1.3S39J7 Arachis hypogaea HOM05D009845 ORTHO05D010624 8.7e-08 61.2 47 55.3
arahy.Tifrunner.gnm1.ann1.L3Y80W Arachis hypogaea HOM05D009845 ORTHO05D010624 8.7e-08 61.2 47 55.3
arahy.Tifrunner.gnm1.ann1.W8CL8V Arachis hypogaea HOM05D009845 ORTHO05D010624 8.7e-08 61.2 47 55.3
arahy.Tifrunner.gnm1.ann1.XL5EFA Arachis hypogaea HOM05D009845 ORTHO05D010624 8.7e-08 61.2 47 55.3
arahy.Tifrunner.gnm1.ann1.XS77WZ Arachis hypogaea HOM05D009845 ORTHO05D010624 8.7e-08 61.2 47 55.3
Sabra04G0031300 Salix brachista HOM05D009845 ORTHO05D010624 1.1e-07 60.8 40 70.0
Aa31sc13G60 Aethionema arabicum HOM05D011069 ORTHO05D010624 4.3e-07 58.9 82 42.7
AL4G45920 Arabidopsis lyrata HOM05D011069 ORTHO05D010624 5.7e-07 58.5 137 32.8
AT2G46505 Arabidopsis thaliana HOM05D011069 ORTHO05D010624 5.7e-07 58.5 135 33.3
Nitab4.5_0004553g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 5.7e-07 58.5 48 56.2
Nitab4.5_0003945g0050 Nicotiana tabacum HOM05D018533 ORTHO05D006814 7.4e-07 58.2 39 64.1
Phvul.009G182700 Phaseolus vulgaris HOM05D009845 ORTHO05D010624 9.7e-07 57.8 47 53.2
DCAR_022854 Daucus carota HOM05D000144 ORTHO05D010624 1.3e-06 57.4 44 61.4
Lalb_Chr08g0236141 Lupinus albus HOM05D009845 ORTHO05D010624 1.6e-06 57.0 47 53.2
Lalb_Chr23g0273071 Lupinus albus HOM05D009845 ORTHO05D010624 1.6e-06 57.0 47 53.2
VMungo1309G2800 Vigna mungo HOM05D009845 ORTHO05D010624 1.6e-06 57.0 47 55.3
Glyma.04G178000 Glycine max HOM05D009845 ORTHO05D010624 2.8e-06 56.2 47 55.3


User provided reference genes

Program Settings