Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0060 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 2.2e-199 698.7 354 100.0
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 2.4e-113 412.9 353 65.7
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 1.4e-44 184.5 342 35.7
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 4.6e-43 179.5 281 42.0
Cpa.g.sc12.114 Carica papaya HOM05D004836 ORTHO05D005150 1.7e-42 177.6 312 38.1
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 3.0e-42 176.8 349 35.5
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 1.6e-40 171.0 309 36.9
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 6.2e-40 169.1 325 35.7
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 1.7e-37 161.0 323 34.7
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 3.2e-36 156.8 353 33.4
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 7.0e-36 155.6 264 37.5
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 1.5e-33 147.9 315 34.9
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 1.6e-32 144.4 291 33.3
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 1.1e-31 141.7 297 33.7
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 2.3e-31 140.6 258 35.7
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 2.6e-30 137.1 302 34.8
vmacro11592 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 4.4e-30 136.3 309 32.4
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 7.5e-30 135.6 302 33.4
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 9.9e-30 135.2 287 32.1
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 1.3e-29 134.8 297 33.3
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 8.3e-29 132.1 322 32.0
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 1.9e-28 131.0 257 34.6
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 3.2e-28 130.2 287 31.7
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 7.1e-28 129.0 287 31.4
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 9.2e-28 128.6 360 30.3
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 2.1e-27 127.5 301 32.6
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 4.6e-27 126.3 345 30.1
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 1.7e-26 124.4 326 31.6
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 3.9e-26 123.2 284 32.7
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 2.5e-25 120.6 281 33.5
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 3.3e-25 120.2 331 32.0
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 4.3e-25 119.8 258 33.3
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 1.2e-24 118.2 305 29.8
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 8.1e-24 115.5 309 29.8
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 1.2e-22 111.7 382 29.3
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 3.4e-22 110.2 261 33.3
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 5.8e-22 109.4 279 32.3
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 5.8e-22 109.4 279 32.3
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 5.8e-22 109.4 279 32.3
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 9.9e-22 108.6 268 31.7
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 4.9e-21 106.3 335 28.7
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 1.2e-19 101.7 196 33.2
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 6.0e-19 99.4 311 31.2
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 1.3e-18 98.2 244 32.0
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 1.2e-16 91.7 215 30.7
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 2.1e-16 90.9 352 26.7
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 3.6e-16 90.1 357 26.9
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 3.6e-16 90.1 311 28.6
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 4.7e-16 89.7 304 29.3
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 4.7e-16 89.7 318 27.0
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.4e-15 88.2 314 29.3
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 1.4e-15 88.2 310 28.4
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 3.1e-15 87.0 207 31.9
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 3.1e-15 87.0 307 26.4
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 5.3e-15 86.3 351 25.6
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 1.5e-14 84.7 308 25.3
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 2.6e-14 84.0 143 38.5
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 3.4e-14 83.6 287 27.2
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 7.6e-14 82.4 161 35.4
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 1.3e-13 81.6 91 42.9
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 4.9e-13 79.7 96 38.5
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 4.9e-13 79.7 90 43.3
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 6.4e-13 79.3 66 60.6
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 6.4e-13 79.3 300 25.3
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 1.1e-12 78.6 122 36.1
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 1.4e-12 78.2 308 25.6
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 4.2e-12 76.6 314 30.9
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 4.2e-12 76.6 344 26.5
TPR.G26309 Trifolium pratense HOM05D004836 ORTHO05D005150 5.4e-12 76.3 147 36.1
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 9.3e-12 75.5 222 30.6
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 1.2e-11 75.1 101 39.6
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 1.6e-11 74.7 179 29.1
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 2.7e-11 73.9 102 37.3
Sed0003689 Sechium edule HOM05D004836 ORTHO05D005150 3.5e-11 73.6 98 39.8
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 6.0e-11 72.8 102 36.3
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 1.3e-10 71.6 150 32.7
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 5.1e-10 69.7 135 31.1
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 6.6e-10 69.3 135 31.1
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 6.6e-10 69.3 292 24.3
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 1.5e-09 68.2 175 29.1
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 1.9e-09 67.8 178 28.7
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 3.3e-09 67.0 325 23.1
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 1.3e-08 65.1 317 26.2
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 1.3e-08 65.1 307 26.4
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 2.1e-08 64.3 188 26.1
Lj1A890T52 Lonicera japonica HOM05D004836 ORTHO05D005150 3.6e-08 63.5 218 28.0
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 4.8e-08 63.2 200 29.0
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 1.1e-07 62.0 362 24.6
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 1.8e-07 61.2 322 25.8
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 2.4e-07 60.8 314 25.5
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 3.1e-07 60.5 294 27.9
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 5.3e-07 59.7 221 27.6
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 6.9e-07 59.3 100 28.0
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 6.9e-07 59.3 221 27.6
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 9.0e-07 58.9 80 35.0
BcaB08g35941 Brassica carinata HOM05D004836 ORTHO05D005150 1.2e-06 58.5 106 36.8
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 1.2e-06 58.5 141 31.2
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 2.0e-06 57.8 80 37.5
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 2.6e-06 57.4 291 24.4


User provided reference genes

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