Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 8.6e-161 570.5 331 100.0
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.2e-117 427.2 328 75.3
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.2e-114 417.2 327 75.5
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.0e-113 414.1 332 72.3
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 1.0e-113 414.1 328 72.6
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.5e-112 410.2 327 73.4
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 2.5e-112 409.5 336 71.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.4e-112 407.9 328 73.2
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.1e-111 406.4 328 72.9
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.7e-111 405.6 327 71.9
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 1.1e-110 404.1 327 72.8
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.8e-110 403.3 327 74.0
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 2.4e-110 402.9 328 72.6
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.4e-110 402.9 326 69.6
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.5e-109 400.2 328 71.3
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.0e-109 399.8 328 69.8
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.4e-109 399.1 331 71.9
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 2.5e-107 392.9 327 72.8
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 2.5e-107 392.9 327 72.8
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 4.2e-107 392.1 329 72.9
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.8e-105 386.7 327 67.0
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 6.7e-105 384.8 325 71.1
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.1e-104 384.0 323 72.1
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.5e-104 383.6 329 69.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.5e-104 383.6 331 68.3
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.9e-104 383.3 325 70.5
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 5.7e-104 381.7 327 68.8
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 1.6e-103 380.2 327 69.7
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 2.1e-103 379.8 330 69.1
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 3.7e-103 379.0 324 66.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 3.7e-103 379.0 324 69.1
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 8.2e-103 377.9 327 69.1
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 4.1e-102 375.6 320 68.8
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 6.9e-102 374.8 323 68.7
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.2e-101 374.0 332 67.5
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 2.6e-101 372.9 320 69.7
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.0e-100 370.9 327 68.5
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.3e-100 370.5 327 69.1
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.1e-99 367.5 332 68.7
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.9e-99 366.7 337 65.9
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 4.2e-99 365.5 320 70.3
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 5.5e-99 365.2 339 64.9
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 9.3e-99 364.4 320 69.4
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 9.3e-99 364.4 326 67.2
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.6e-98 363.6 319 69.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 3.5e-98 362.5 332 68.7
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 4.6e-98 362.1 332 66.9
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 4.6e-98 362.1 322 61.5
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 1.0e-97 360.9 329 67.5
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.0e-97 360.9 327 67.3
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.3e-97 359.8 318 70.1
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 3.0e-97 359.4 326 68.1
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 8.7e-97 357.8 322 67.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.5e-96 357.1 357 58.3
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 8.2e-95 351.3 327 63.9
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.4e-94 350.5 326 67.2
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 2.4e-94 349.7 351 58.7
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 4.1e-94 349.0 329 65.7
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 6.9e-94 348.2 319 68.7
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 2.0e-93 346.7 324 64.5
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.6e-93 346.3 327 61.5
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 4.5e-93 345.5 342 53.2
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 5.9e-93 345.1 327 66.4
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 3.2e-91 339.3 351 56.7
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 3.2e-91 339.3 324 63.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 4.2e-91 339.0 325 63.4
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 5.5e-91 338.6 324 64.2
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 1.2e-90 337.4 326 63.8
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 4.6e-90 335.5 326 63.8
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 4.6e-90 335.5 324 64.5
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 6.1e-90 335.1 327 64.8
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 5.1e-89 332.0 328 63.1
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 8.8e-89 331.3 327 62.4
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.3e-87 327.4 327 64.2
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.7e-87 327.0 326 64.7
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.7e-87 325.9 328 61.9
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 4.8e-87 325.5 311 64.0
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 2.4e-86 323.2 327 56.0
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 3.1e-86 322.8 337 60.5
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 3.1e-86 322.8 328 61.6
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 5.3e-86 322.0 301 69.8
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.3e-86 322.0 332 63.6
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.3e-86 322.0 332 63.6
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 2.2e-84 316.6 323 59.8
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 8.5e-84 314.7 326 58.6
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 4.2e-83 312.4 332 62.0
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 9.4e-83 311.2 331 62.2
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.2e-82 310.8 329 62.0
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 2.7e-82 309.7 331 62.2
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 3.3e-80 302.8 322 61.5
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.6e-74 283.9 332 56.0
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.1e-74 283.5 329 57.4
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 7.5e-72 275.0 283 64.0
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 5.3e-70 268.9 336 44.9
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 6.5e-68 261.9 167 69.5
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 6.5e-68 261.9 167 70.1
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.5e-67 260.8 312 56.7
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.6e-66 257.3 165 70.3
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 6.1e-66 255.4 167 68.9
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.8e-65 251.9 165 69.7
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 2.6e-64 250.0 328 49.4
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-60 237.3 168 66.1
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.2e-60 236.9 167 65.3
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.8e-60 236.1 325 52.0
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 3.2e-59 233.0 318 52.8
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.6e-58 229.6 168 64.9
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.0e-57 228.0 253 45.8
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.2e-56 224.6 168 61.9
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.0e-53 213.8 192 56.2
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 4.3e-51 206.1 167 58.1
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 9.8e-48 194.9 172 55.8
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.4e-41 174.5 181 49.7
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 6.8e-41 172.2 172 50.6
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.5e-35 153.7 210 58.1
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.6e-32 143.7 97 70.1
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 4.1e-30 136.3 98 68.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 2.1e-29 134.0 252 32.5
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 6.6e-28 129.0 337 36.5
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.1e-26 124.0 169 37.9
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.1e-26 124.0 78 76.9
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.0e-24 117.5 338 31.7
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 5.8e-24 115.9 82 70.7
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 2.4e-22 110.5 69 75.4
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 3.2e-22 110.2 253 47.4
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 4.7e-18 96.3 61 67.2
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.3e-15 88.2 61 65.6
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 1.0e-12 78.6 123 37.4
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.7e-12 75.5 58 62.1
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.6e-10 71.2 48 66.7
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 9.9e-08 62.0 180 24.4
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 6.4e-07 59.3 152 30.9
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 2.4e-06 57.4 48 56.2


User provided reference genes

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