Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.1e-207 724.9 374 100.0
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 9.4e-55 218.4 119 85.7
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 6.3e-51 205.7 119 79.0
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 8.2e-51 205.3 119 77.3
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.4e-50 204.5 119 79.0
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 2.4e-50 203.8 119 80.7
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.1e-50 203.0 119 79.0
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 5.3e-50 202.6 119 79.8
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 6.9e-50 202.2 119 79.8
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 6.9e-50 202.2 119 79.0
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.2e-49 201.4 120 77.5
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.2e-49 201.4 119 78.2
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 2.0e-49 200.7 119 78.2
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.6e-49 200.3 119 77.3
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.6e-49 200.3 119 77.3
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 2.6e-49 200.3 119 76.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.4e-49 199.9 119 77.3
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 3.4e-49 199.9 119 78.2
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.4e-49 199.9 119 77.3
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 4.5e-49 199.5 119 75.6
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.5e-49 199.5 119 75.6
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.5e-49 199.5 119 75.6
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 4.5e-49 199.5 119 77.3
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 5.9e-49 199.1 119 76.5
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 5.9e-49 199.1 119 79.0
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.7e-49 198.7 119 75.6
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 1.0e-48 198.4 119 77.3
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.0e-48 198.4 119 77.3
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.3e-48 198.0 119 78.2
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.3e-48 198.0 119 76.5
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.3e-48 198.0 119 75.6
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.3e-48 198.0 119 76.5
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 1.7e-48 197.6 119 77.3
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.2e-48 197.2 119 76.5
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.2e-48 197.2 119 76.5
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 2.2e-48 197.2 119 76.5
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 2.9e-48 196.8 119 75.6
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 2.9e-48 196.8 119 74.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 2.9e-48 196.8 119 76.5
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 3.8e-48 196.4 119 75.6
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 3.8e-48 196.4 119 76.5
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 3.8e-48 196.4 119 75.6
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 5.0e-48 196.1 119 75.6
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 6.5e-48 195.7 119 75.6
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 6.5e-48 195.7 119 77.3
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 6.5e-48 195.7 119 77.3
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 6.5e-48 195.7 119 74.8
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 6.5e-48 195.7 119 74.8
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 6.5e-48 195.7 119 74.8
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 6.5e-48 195.7 122 74.6
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 8.5e-48 195.3 119 74.8
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 8.5e-48 195.3 119 76.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.1e-47 194.9 119 74.8
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.1e-47 194.9 119 77.3
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.1e-47 194.9 119 76.5
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.4e-47 194.5 119 74.8
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.4e-47 194.5 119 74.8
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.4e-47 194.5 119 74.8
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.4e-47 194.5 119 74.8
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.4e-47 194.5 119 77.3
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 1.9e-47 194.1 119 74.8
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 2.5e-47 193.7 119 74.8
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 2.5e-47 193.7 119 74.8
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 2.5e-47 193.7 119 74.8
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 3.2e-47 193.4 119 73.9
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 3.2e-47 193.4 119 73.9
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 3.2e-47 193.4 119 73.9
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 4.2e-47 193.0 119 74.8
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 4.2e-47 193.0 119 73.9
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 4.2e-47 193.0 118 77.1
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 4.2e-47 193.0 119 74.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 5.5e-47 192.6 119 73.9
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 5.5e-47 192.6 119 73.9
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 5.5e-47 192.6 119 73.9
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 7.2e-47 192.2 119 74.8
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 7.2e-47 192.2 119 73.9
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 7.2e-47 192.2 119 73.9
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 7.2e-47 192.2 119 75.6
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 7.2e-47 192.2 144 64.6
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 9.4e-47 191.8 119 73.9
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 9.4e-47 191.8 119 74.8
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 9.4e-47 191.8 119 73.1
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.2e-46 191.4 119 75.6
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 1.2e-46 191.4 119 73.9
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.6e-46 191.0 115 75.7
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.1e-46 190.7 119 72.3
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.1e-46 190.7 119 74.8
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 6.1e-46 189.1 119 73.1
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.0e-45 188.3 119 71.4
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 1.0e-45 188.3 119 71.4
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.0e-45 188.3 119 71.4
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.4e-45 188.0 117 75.2
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.8e-45 187.6 119 73.1
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.8e-45 187.6 119 74.8
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.3e-45 187.2 119 72.3
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 3.0e-45 186.8 119 71.4
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 3.0e-45 186.8 119 72.3
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 3.0e-45 186.8 119 72.3
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.1e-45 186.0 112 77.7
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 8.8e-45 185.3 119 71.4
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.0e-44 184.1 119 72.3
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.6e-44 183.7 119 72.3
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 4.8e-43 179.5 119 68.9
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.5e-41 174.5 112 70.5
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 2.0e-41 174.1 120 63.3
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 7.7e-41 172.2 119 63.0
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.1e-36 158.3 126 59.5
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 8.5e-32 142.1 120 55.0
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.6e-30 137.9 119 55.5
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.6e-28 130.6 132 50.0
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 2.0e-25 120.9 111 54.1
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 1.0e-24 118.6 62 90.3
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.1e-23 115.2 58 82.8
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 7.2e-23 112.5 78 66.7
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 6.1e-22 109.4 59 78.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.4e-21 108.2 58 81.0
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 8.0e-14 82.4 48 72.9
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 5.0e-08 63.2 61 52.5


User provided reference genes

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