Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 9.9e-55 216.5 104 100.0
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.8e-49 198.4 104 91.3
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 3.2e-45 184.9 104 84.6
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.2e-44 183.0 103 83.5
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 7.9e-44 180.3 104 82.7
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.7e-43 179.1 100 84.0
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.7e-43 179.1 104 81.7
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.9e-43 177.9 104 79.8
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.1e-42 176.4 100 83.0
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.5e-42 176.0 104 81.7
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.9e-42 175.6 100 82.0
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.5e-42 175.3 104 81.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 3.3e-42 174.9 104 78.8
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 4.3e-42 174.5 105 81.0
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 4.3e-42 174.5 110 78.2
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 5.6e-42 174.1 104 77.9
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.3e-42 173.7 100 82.0
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 7.3e-42 173.7 100 82.0
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 9.6e-42 173.3 104 76.9
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.3e-41 172.9 104 77.9
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.6e-41 172.6 104 78.8
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.8e-41 171.8 100 81.0
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 3.6e-41 171.4 105 78.1
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 6.2e-41 170.6 106 78.3
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 6.2e-41 170.6 106 78.3
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 8.1e-41 170.2 104 77.9
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 8.1e-41 170.2 100 80.0
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 1.4e-40 169.5 104 76.9
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.4e-40 169.5 106 78.3
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.4e-40 169.5 105 80.0
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 1.8e-40 169.1 103 80.6
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 2.4e-40 168.7 104 76.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 3.1e-40 168.3 106 77.4
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 5.3e-40 167.5 104 76.9
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 6.9e-40 167.2 105 78.1
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 9.0e-40 166.8 106 77.4
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.5e-39 166.0 106 76.4
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.6e-39 165.2 85 87.1
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 3.4e-39 164.9 104 77.9
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.5e-39 164.5 104 79.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 5.8e-39 164.1 90 86.7
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 5.8e-39 164.1 104 75.0
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 7.6e-39 163.7 84 88.1
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 7.6e-39 163.7 113 72.6
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 9.9e-39 163.3 105 75.2
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.7e-38 162.5 105 76.2
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 2.9e-38 161.8 102 73.5
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.9e-38 161.8 86 84.9
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 4.9e-38 161.0 112 73.2
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 6.4e-38 160.6 105 77.1
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 2.4e-37 158.7 106 73.6
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 3.2e-37 158.3 105 74.3
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 4.2e-37 157.9 112 71.4
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 4.2e-37 157.9 112 71.4
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 4.2e-37 157.9 107 75.7
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 4.2e-37 157.9 112 71.4
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 9.3e-37 156.8 112 70.5
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 1.2e-36 156.4 106 73.6
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.2e-36 156.4 106 73.6
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 1.6e-36 156.0 112 70.5
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.6e-36 156.0 107 72.9
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.1e-36 155.6 112 70.5
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.7e-36 155.2 112 70.5
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 3.5e-36 154.8 105 72.4
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.6e-36 154.5 106 70.8
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 7.9e-36 153.7 112 68.8
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.0e-35 153.3 107 72.0
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 1.0e-35 153.3 106 71.7
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.3e-35 152.9 106 70.8
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.8e-35 152.5 107 71.0
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.3e-35 152.1 104 72.1
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 2.3e-35 152.1 107 69.2
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 3.0e-35 151.8 113 68.1
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.9e-35 151.4 100 74.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 5.1e-35 151.0 104 70.2
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 5.1e-35 151.0 108 71.3
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 6.7e-35 150.6 112 66.1
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 6.7e-35 150.6 113 66.4
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 6.7e-35 150.6 91 76.9
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 8.7e-35 150.2 113 68.1
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.1e-34 149.8 113 67.3
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.1e-34 149.8 113 67.3
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.1e-34 149.8 74 87.8
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 1.5e-34 149.4 106 71.7
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.9e-34 149.1 112 66.1
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.9e-34 149.1 112 66.1
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 2.5e-34 148.7 106 69.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.3e-34 148.3 75 86.7
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 4.3e-34 147.9 98 73.5
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.6e-34 147.5 74 89.2
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 7.4e-34 147.1 74 89.2
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 2.1e-33 145.6 115 65.2
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.1e-32 143.3 104 70.2
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 5.3e-32 141.0 104 68.3
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 9.0e-32 140.2 66 95.5
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 2.0e-31 139.0 104 68.3
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.0e-30 136.7 86 77.9
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.3e-30 136.3 106 63.2
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.1e-29 133.3 80 75.0
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 4.2e-29 131.3 64 92.2
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 1.2e-28 129.8 62 93.5
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 4.6e-28 127.9 104 62.5
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 6.0e-28 127.5 65 87.7
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.8e-27 125.9 76 76.3
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 3.9e-27 124.8 93 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.9e-26 122.5 95 58.9
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 7.4e-26 120.6 99 59.6
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 7.4e-26 120.6 72 70.8
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 7.4e-26 120.6 62 87.1
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 3.7e-25 118.2 73 69.9
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 6.9e-24 114.0 65 84.6
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.1e-21 106.7 73 67.1
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.3e-19 99.0 82 67.1
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 5.7e-18 94.4 69 73.9
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 3.7e-17 91.7 97 53.6
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 6.3e-17 90.9 69 69.6
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 4.5e-15 84.7 86 54.7
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.8e-11 72.8 65 56.9
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.1e-08 63.5 35 71.4


User provided reference genes

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