Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.4e-50 202.6 99 100.0
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.6e-46 188.0 97 92.8
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.4e-44 181.4 97 88.7
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 8.6e-40 166.8 94 84.0
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 8.6e-40 166.8 96 84.4
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.9e-39 165.6 94 80.9
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 3.2e-39 164.9 95 84.2
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 3.2e-39 164.9 95 77.9
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 4.2e-39 164.5 95 84.2
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 9.5e-39 163.3 97 80.4
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.2e-38 162.9 94 81.9
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 2.3e-37 158.7 101 77.2
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 4.0e-37 157.9 94 75.5
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 5.2e-37 157.5 92 78.3
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 8.8e-37 156.8 97 78.4
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 8.8e-37 156.8 96 80.2
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 1.5e-36 156.0 94 73.4
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 2.0e-36 155.6 96 74.0
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.4e-36 154.8 97 77.3
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 3.4e-36 154.8 97 75.3
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 4.4e-36 154.5 96 72.9
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 5.7e-36 154.1 91 81.3
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 5.7e-36 154.1 96 74.0
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 76.3
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 77.3
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 77.3
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 76.3
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 78.4
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 7.5e-36 153.7 96 80.2
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 7.5e-36 153.7 96 80.2
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 9.8e-36 153.3 95 74.7
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 9.8e-36 153.3 92 79.3
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 1.3e-35 152.9 98 78.6
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 1.3e-35 152.9 96 80.2
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 1.3e-35 152.9 97 76.3
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.7e-35 152.5 95 72.6
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 1.7e-35 152.5 95 76.8
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 2.2e-35 152.1 95 75.8
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 3.7e-35 151.4 96 71.9
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 3.7e-35 151.4 96 71.9
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 3.7e-35 151.4 96 71.9
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 3.7e-35 151.4 95 77.9
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 3.7e-35 151.4 98 76.5
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 3.7e-35 151.4 95 77.9
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.7e-35 151.4 94 75.5
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 3.7e-35 151.4 98 75.5
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 3.7e-35 151.4 96 76.0
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 3.7e-35 151.4 95 76.8
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 4.9e-35 151.0 96 72.9
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 4.9e-35 151.0 96 72.9
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 4.9e-35 151.0 96 72.9
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 4.9e-35 151.0 96 72.9
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 4.9e-35 151.0 91 79.1
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 4.9e-35 151.0 99 79.8
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.1e-34 149.8 96 78.1
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 1.1e-34 149.8 97 76.3
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 1.1e-34 149.8 99 73.7
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 1.4e-34 149.4 95 75.8
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 2.4e-34 148.7 96 71.9
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 3.1e-34 148.3 95 74.7
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.1e-34 148.3 91 76.9
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 4.1e-34 147.9 96 71.9
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 5.4e-34 147.5 99 77.8
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 7.0e-34 147.1 95 75.8
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 7.0e-34 147.1 92 73.9
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 9.2e-34 146.7 94 70.2
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 9.2e-34 146.7 94 73.4
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 9.2e-34 146.7 96 76.0
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.6e-33 146.0 97 76.3
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.6e-33 146.0 91 75.8
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.6e-33 146.0 91 75.8
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 2.0e-33 145.6 95 70.5
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 2.0e-33 145.6 97 72.2
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 3.5e-33 144.8 92 76.1
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 4.5e-33 144.4 94 74.5
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 5.9e-33 144.1 94 74.5
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 5.9e-33 144.1 94 74.5
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 7.8e-33 143.7 91 74.7
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 7.8e-33 143.7 91 74.7
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 2.9e-32 141.7 87 77.0
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 2.9e-32 141.7 95 70.5
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 8.6e-32 140.2 92 68.5
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.1e-31 139.8 91 73.6
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 1.9e-31 139.0 95 69.5
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.5e-31 138.7 97 72.2
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 5.6e-31 137.5 94 71.3
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.6e-31 137.5 94 70.2
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 1.6e-30 136.0 95 67.4
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 2.1e-30 135.6 95 70.5
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 2.8e-30 135.2 82 76.8
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 6.1e-30 134.0 96 66.7
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 3.0e-29 131.7 94 70.2
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 6.8e-29 130.6 94 69.1
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 1.2e-28 129.8 92 67.4
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 3.4e-28 128.3 98 67.3
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 2.9e-27 125.2 95 66.3
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.7e-27 124.8 93 65.6
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.7e-27 124.8 99 65.7
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 6.4e-27 124.0 96 65.6
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 8.3e-27 123.6 93 65.6
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 2.4e-26 122.1 93 66.7
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.2e-26 121.7 84 73.8
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.2e-26 121.7 84 73.8
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 4.1e-26 121.3 95 63.2
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.2e-25 119.8 99 61.6
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.6e-25 119.4 94 61.7
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.6e-25 119.4 99 62.6
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.5e-25 118.2 93 61.3
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.0e-24 116.7 92 60.9
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.9e-23 112.5 81 67.9
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.6e-22 109.4 97 62.9
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 3.1e-21 105.1 94 57.4
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 4.0e-21 104.8 98 55.1
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 7.5e-20 100.5 98 55.1
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 9.8e-20 100.1 94 59.6
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.3e-19 99.8 91 54.9
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.2e-19 99.0 95 61.1
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.9e-19 98.6 93 61.3
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 3.7e-19 98.2 76 63.2
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 8.3e-19 97.1 69 71.0
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.4e-18 95.5 96 52.1
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 5.0e-16 87.8 101 49.5
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 8.6e-16 87.0 96 50.0
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.5e-15 86.3 97 46.4
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 1.2e-14 83.2 101 48.5
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 1.0e-08 63.5 100 43.0
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 3.0e-08 62.0 88 37.5
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 2.5e-07 58.9 40 62.5
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 9.5e-07 57.0 43 69.8
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.6e-06 56.2 60 53.3


User provided reference genes

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