Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G1470 Tripterygium wilfordii HOM05D001861 ORTHO05D001868 1.9e-154 549.3 315 100.0
Haze_04414 Corylus avellana HOM05D001861 ORTHO05D001868 4.2e-24 116.3 353 31.2
Cfa006362 Carpinus fangiana HOM05D001861 ORTHO05D001868 1.2e-23 114.8 353 30.3
Prupe.6G350800 Prunus persica HOM05D001861 ORTHO05D001868 4.7e-23 112.8 243 36.2
COL.COLO4_15500 Corchorus olitorius HOM05D001861 ORTHO05D001868 3.0e-22 110.2 391 30.7
Sabra13G0043700 Salix brachista HOM05D001861 ORTHO05D001868 1.7e-20 104.4 403 26.8
Potri.013G047700 Populus trichocarpa HOM05D001861 ORTHO05D001868 1.8e-19 100.9 395 26.8
Thecc.05G270000 Theobroma cacao HOM05D001861 ORTHO05D001868 5.3e-19 99.4 407 27.0
MD12G1249400 Malus domestica HOM05D001861 ORTHO05D001868 9.1e-19 98.6 393 28.8
Gorai.007G274900 Gossypium raimondii HOM05D001861 ORTHO05D001868 1.6e-18 97.8 374 28.3
Gohir.D11G256600 Gossypium hirsutum HOM05D001861 ORTHO05D001868 5.9e-18 95.9 374 28.1
QL03p029819 Quercus lobata HOM05D001861 ORTHO05D001868 5.9e-18 95.9 403 28.3
Gohir.A11G246400 Gossypium hirsutum HOM05D001861 ORTHO05D001868 3.8e-17 93.2 375 27.7
Duzib177G0739 Durio zibethinus HOM05D001861 ORTHO05D001868 3.2e-16 90.1 403 27.0
Manes.08G140100 Manihot esculenta HOM05D001861 ORTHO05D001868 5.5e-16 89.4 232 32.8
Ciclev10021910m.g Citrus clementina HOM05D001861 ORTHO05D001868 9.4e-16 88.6 230 32.2
Atru.chr2.1000 Acer truncatum HOM05D001861 ORTHO05D001868 2.7e-15 87.0 403 27.5
AUR62040915 Chenopodium quinoa HOM05D001861 ORTHO05D001868 5.2e-14 82.8 334 27.5
CsaV3_2G009870 Cucumis sativus L. HOM05D001861 ORTHO05D001868 5.2e-14 82.8 240 29.2
MELO3C008695.2 Cucumis melo HOM05D001861 ORTHO05D001868 2.6e-13 80.5 228 28.5
TAR362G1165 Trochodendron aralioides HOM05D001861 ORTHO05D001868 3.3e-13 80.1 418 24.9
ClCG11G010520 Citrullus lanatus HOM05D001861 ORTHO05D001868 4.4e-13 79.7 231 29.9
GSVIVG01023442001 Vitis vinifera HOM05D001861 ORTHO05D001868 4.4e-13 79.7 239 31.4
FAN05G5582 Fragaria x ananassa HOM05D001861 ORTHO05D001868 1.3e-12 78.2 218 32.6
MD04G1231100 Malus domestica HOM05D001861 ORTHO05D001868 1.3e-12 78.2 363 26.7
Cpa.g.sc306.5 Carica papaya HOM05D001861 ORTHO05D001868 2.2e-12 77.4 296 28.7
Eucgr.H04224 Eucalyptus grandis HOM05D001861 ORTHO05D001868 2.2e-12 77.4 229 33.2
Lj1g0025782 Lotus japonicus HOM05D001861 ORTHO05D001868 4.8e-12 76.3 241 30.7
FAN05G0278 Fragaria x ananassa HOM05D001861 ORTHO05D001868 1.4e-11 74.7 223 30.9
FAN09G3342 Fragaria x ananassa HOM05D001861 ORTHO05D001868 1.4e-11 74.7 217 31.3
PGR004G2436 Punica granatum HOM05D001861 ORTHO05D001868 3.1e-11 73.6 231 32.5
FvH4_6g01750 Fragaria vesca HOM05D001861 ORTHO05D001868 1.2e-10 71.6 229 31.0
FAN14G2355 Fragaria x ananassa HOM05D001861 ORTHO05D001868 1.2e-10 71.6 229 31.0
FAN14G5619 Fragaria x ananassa HOM05D001861 ORTHO05D001868 1.2e-10 71.6 229 31.0
AUR62004829 Chenopodium quinoa HOM05D001861 ORTHO05D001868 2.7e-10 70.5 218 29.8
EL10Ac4g08993 Beta vulgaris HOM05D001861 ORTHO05D001868 1.3e-09 68.2 209 31.6
PSO832G1062 Papaver somniferum HOM05D001861 ORTHO05D001868 2.2e-09 67.4 252 27.4
PSO674G0045 Papaver somniferum HOM05D001861 ORTHO05D001868 3.8e-09 66.6 255 27.1
arahy.Tifrunner.gnm1.ann1.M57DEN Arachis hypogaea HOM05D001861 ORTHO05D001868 5.0e-09 66.2 222 27.9
Nitab4.5_0010745g0010 Nicotiana tabacum HOM05D001861 ORTHO05D020309 5.0e-09 66.2 211 29.9
Sed0009743 Sechium edule HOM05D001861 ORTHO05D001868 5.0e-09 66.2 232 28.4
Hund06903 Selenicereus undatus HOM05D001861 ORTHO05D001868 6.5e-09 65.9 202 30.2
CiPaw.07G073500 Carya illinoinensis HOM05D001861 ORTHO05D001868 8.5e-09 65.5 186 32.8
Sc20g0000700 Simmondsia chinensis HOM05D001861 ORTHO05D001868 1.9e-08 64.3 194 32.5
Nitab4.5_0000091g0480 Nicotiana tabacum HOM05D001861 ORTHO05D020309 3.2e-08 63.5 206 30.6
Oeu014533.1 Olea europaea HOM05D001861 ORTHO05D001868 3.2e-08 63.5 193 26.9
RcHm_v2.0_Chr3g0449491 Rosa chinensis HOM05D001861 ORTHO05D001868 3.2e-08 63.5 220 30.5
Glyma.03G250200 Glycine max HOM05D001861 ORTHO05D001868 5.5e-08 62.8 219 30.1
Glyma.19G247800 Glycine max HOM05D001861 ORTHO05D001868 5.5e-08 62.8 313 27.5
Aqoxy5G00168 Aquilegia oxysepala HOM05D001861 ORTHO05D001868 7.2e-08 62.4 231 26.4
arahy.Tifrunner.gnm1.ann1.1WV257 Arachis hypogaea HOM05D001861 ORTHO05D001868 7.2e-08 62.4 222 27.5
TAR633G1161 Trochodendron aralioides HOM05D001861 ORTHO05D001868 1.2e-07 61.6 418 28.2
CSS0044247 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 3.6e-07 60.1 252 27.4
Nn1g02913 Nelumbo nucifera HOM05D001861 ORTHO05D001868 6.1e-07 59.3 252 27.4
Cc02_g08730 Coffea canephora HOM05D001861 ORTHO05D001868 8.0e-07 58.9 244 25.8
CANSAT54G0422 Cannabis sativa HOM05D001861 ORTHO05D001868 1.8e-06 57.8 247 26.7
Lj2A44T76 Lonicera japonica HOM05D001861 ORTHO05D001868 1.8e-06 57.8 236 30.1
Peaxi162Scf00155g00022 Petunia axillaris HOM05D001861 ORTHO05D020309 4.0e-06 56.6 215 28.8
GSVIVG01028395001 Vitis vinifera HOM05D001861 ORTHO05D001868 5.2e-06 56.2 129 35.7


User provided reference genes

Program Settings