Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 9.9e-19 96.3 69 100.0
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 7.1e-09 63.5 73 53.4
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.2e-08 62.8 74 58.1
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.6e-08 62.4 71 50.7
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.6e-08 62.4 72 51.4
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 2.7e-08 61.6 76 65.8
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.6e-08 60.8 73 58.9
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 7.9e-08 60.1 70 55.7
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 7.9e-08 60.1 75 50.7
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.0e-07 59.7 72 52.8
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 1.0e-07 59.7 79 63.3
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.0e-07 59.7 72 63.9
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.0e-07 59.7 78 47.4
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.3e-07 59.3 73 52.1
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 1.3e-07 59.3 73 52.1
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.8e-07 58.9 73 52.1
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.8e-07 58.9 79 48.1
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 2.3e-07 58.5 71 74.6
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 2.3e-07 58.5 72 50.0
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 2.3e-07 58.5 72 50.0
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 3.0e-07 58.2 76 48.7
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 3.0e-07 58.2 71 47.9
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 3.0e-07 58.2 77 57.1
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 3.0e-07 58.2 69 62.3
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 3.0e-07 58.2 79 49.4
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 3.9e-07 57.8 71 47.9
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 3.9e-07 57.8 69 47.8
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.9e-07 57.8 69 47.8
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 3.9e-07 57.8 72 47.2
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 3.9e-07 57.8 74 48.6
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 5.1e-07 57.4 69 65.2
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 5.1e-07 57.4 74 48.6
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 5.1e-07 57.4 74 48.6
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 8.7e-07 56.6 82 64.6
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.1e-06 56.2 78 47.4
Actinidia39315 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.5e-06 55.8 74 63.5
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 1.5e-06 55.8 69 63.8
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.5e-06 55.8 80 46.2
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 1.5e-06 55.8 80 46.2
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 1.5e-06 55.8 75 52.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 1.5e-06 55.8 75 46.7
CSS0009794 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 1.9e-06 55.5 76 64.5
CSS0043976 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 1.9e-06 55.5 76 64.5
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.9e-06 55.5 79 43.0
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 1.9e-06 55.5 69 46.4
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.9e-06 55.5 76 57.9
Actinidia30473 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.5e-06 55.1 74 63.5
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 2.5e-06 55.1 79 44.3
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 2.5e-06 55.1 77 42.9
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 2.5e-06 55.1 76 51.3
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 3.3e-06 54.7 82 43.9
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 3.3e-06 54.7 69 44.9
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 4.3e-06 54.3 82 43.9
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 4.3e-06 54.3 73 46.6
CSS0043101 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 4.3e-06 54.3 39 66.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.3e-06 54.3 81 45.7
Gohir.D02G180001 Gossypium hirsutum HOM05D025024 ORTHO05D004056 4.3e-06 54.3 69 44.9
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 4.3e-06 54.3 69 44.9
Hund01100 Selenicereus undatus HOM05D005953 ORTHO05D004056 4.3e-06 54.3 69 47.8
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 5.6e-06 53.9 77 64.9
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 5.6e-06 53.9 81 49.4
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 5.6e-06 53.9 81 49.4
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 5.6e-06 53.9 75 48.0
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 5.6e-06 53.9 80 62.5
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 5.6e-06 53.9 76 53.9
vmacro09282 Vaccinium macrocarpon HOM05D005953 ORTHO05D004056 5.6e-06 53.9 29 86.2
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 7.4e-06 53.5 72 45.8
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 7.4e-06 53.5 71 46.5
vmacro12298 Vaccinium macrocarpon HOM05D005953 ORTHO05D004056 7.4e-06 53.5 37 64.9
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 9.6e-06 53.1 73 46.6
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 9.6e-06 53.1 74 60.8
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 9.6e-06 53.1 77 66.2
Phvul.004G108400 Phaseolus vulgaris HOM05D025024 ORTHO05D004056 9.6e-06 53.1 69 63.8


User provided reference genes

Program Settings