Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 6.5e-134 480.7 241 100.0
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 3.2e-80 302.4 242 61.6
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.3e-78 297.0 243 61.7
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 1.9e-77 293.1 244 62.3
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 4.3e-77 292.0 243 58.4
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 9.6e-77 290.8 243 60.1
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 1.6e-76 290.0 242 58.3
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 6.2e-76 288.1 243 58.0
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 1.8e-75 286.6 242 57.0
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 3.4e-74 282.3 243 58.0
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 1.9e-72 276.6 241 56.0
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 5.1e-70 268.5 242 58.3
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 3.3e-69 265.8 243 56.4
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 2.1e-68 263.1 243 56.0
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 2.1e-68 263.1 243 53.5
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 8.1e-68 261.2 243 56.0
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 1.8e-67 260.0 244 55.7
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 3.1e-67 259.2 245 53.9
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 4.0e-67 258.8 245 55.5
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 5.3e-67 258.5 241 49.8
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 9.0e-67 257.7 242 53.3
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 9.0e-67 257.7 241 55.6
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 7.6e-66 254.6 242 54.5
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 1.3e-65 253.8 243 53.1
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.2e-65 253.1 243 54.3
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 4.9e-65 251.9 243 54.3
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 1.4e-64 250.4 243 52.3
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 1.9e-64 250.0 243 52.3
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 3.2e-64 249.2 243 53.9
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 1.6e-63 246.9 243 52.7
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 1.6e-63 246.9 243 52.7
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 1.6e-63 246.9 243 51.4
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 2.1e-63 246.5 243 51.0
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 7.9e-63 244.6 243 49.8
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 1.7e-62 243.4 247 49.4
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 1.7e-62 243.4 243 51.9
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 2.3e-62 243.0 243 52.3
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 3.0e-62 242.7 243 51.0
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 3.0e-62 242.7 243 51.0
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 3.9e-62 242.3 245 51.8
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 1.1e-61 240.7 246 50.0
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 1.5e-61 240.4 241 47.7
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 3.3e-61 239.2 243 49.4
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 1.6e-60 236.9 243 49.0
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 3.6e-60 235.7 243 49.4
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 4.8e-60 235.3 242 49.2
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 1.4e-59 233.8 247 46.6
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 1.2e-58 230.7 244 49.6
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 4.5e-58 228.8 266 47.7
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 5.8e-58 228.4 186 62.9
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 9.9e-58 227.6 242 46.3
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 1.3e-57 227.3 243 48.6
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 1.3e-57 227.3 242 47.9
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 3.8e-57 225.7 201 55.7
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 6.4e-57 224.9 238 50.8
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 8.4e-57 224.6 246 48.0
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 1.1e-56 224.2 242 47.1
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 1.4e-56 223.8 242 46.3
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 4.2e-56 222.2 242 48.3
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 5.5e-56 221.9 242 49.2
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 9.3e-56 221.1 246 50.4
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 1.2e-55 220.7 242 48.3
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 2.1e-55 219.9 242 47.9
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 2.1e-55 219.9 244 45.1
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 7.9e-55 218.0 243 49.4
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 3.0e-54 216.1 237 48.5
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.9e-54 215.7 242 47.1
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 5.1e-54 215.3 241 45.2
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 1.1e-53 214.2 242 45.5
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 8.1e-52 208.0 292 38.4
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 3.1e-51 206.1 243 46.9
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 9.0e-51 204.5 242 42.6
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 2.0e-50 203.4 246 43.9
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 3.4e-50 202.6 242 44.6
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 1.3e-49 200.7 220 47.3
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 9.3e-48 194.5 168 56.5
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 9.3e-48 194.5 242 45.5
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 1.3e-46 190.7 174 56.3
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 2.8e-44 183.0 205 45.4
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 3.7e-44 182.6 184 47.8
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 4.8e-44 182.2 249 42.2
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 6.9e-43 178.3 248 41.9
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 4.5e-42 175.6 185 49.7
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 5.0e-41 172.2 242 40.9
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.1e-40 171.0 250 38.8
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 4.2e-40 169.1 250 38.4
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 5.5e-40 168.7 250 38.4
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.8e-38 163.7 244 40.6
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 7.4e-37 158.3 242 38.8
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 3.1e-35 152.9 175 45.7
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 5.3e-35 152.1 251 36.3
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 6.9e-35 151.8 174 46.0
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.7e-33 147.1 157 45.9
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 9.4e-32 141.4 241 34.9
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 1.1e-29 134.4 202 39.1
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 3.8e-25 119.4 258 28.7
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.6e-23 114.0 246 32.1
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 5.9e-18 95.5 92 50.0
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 8.8e-14 81.6 70 50.0
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 3.7e-12 76.3 71 50.7
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 4.8e-12 75.9 69 50.7
MBI14_g37361_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 7.2e-08 62.0 85 41.2
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 3.0e-06 56.6 89 39.3


User provided reference genes

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