Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.9e-139 499.2 259 100.0
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 7.4e-67 258.1 272 55.9
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 6.2e-66 255.0 222 61.7
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.1e-65 254.2 245 57.1
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.2e-64 250.8 243 58.8
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 4.5e-64 248.8 206 66.0
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.0e-63 247.7 249 57.8
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 6.5e-63 245.0 153 80.4
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 8.4e-63 244.6 245 58.0
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 5.5e-62 241.9 245 57.6
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 5.5e-62 241.9 248 57.7
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 7.1e-62 241.5 222 59.5
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.6e-61 240.4 212 61.3
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.1e-61 240.0 245 57.6
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.1e-61 240.0 246 56.9
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.6e-61 238.8 247 54.3
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 1.0e-60 237.7 246 55.7
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 2.3e-60 236.5 241 56.0
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 5.1e-60 235.3 241 57.3
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.1e-59 234.2 151 76.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.5e-59 233.8 211 61.1
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.9e-59 233.4 185 66.5
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 3.3e-59 232.6 151 75.5
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 9.7e-59 231.1 199 60.8
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.2e-58 229.9 244 55.7
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.7e-58 229.2 253 52.6
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 4.8e-58 228.8 178 66.3
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 6.3e-58 228.4 239 55.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 6.3e-58 228.4 151 72.2
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 8.2e-58 228.0 151 74.8
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.8e-57 226.9 237 54.0
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 5.3e-57 225.3 160 71.2
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 5.3e-57 225.3 160 71.2
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 6.9e-57 224.9 224 58.0
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 9.0e-57 224.6 253 52.2
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 9.0e-57 224.6 256 52.0
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.5e-56 223.8 209 57.4
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.0e-56 223.4 230 57.4
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.6e-56 223.0 151 71.5
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 3.4e-56 222.6 179 64.2
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.4e-56 222.6 151 70.9
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 5.9e-56 221.9 224 54.0
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 5.9e-56 221.9 150 71.3
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 1.0e-55 221.1 217 55.8
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.0e-55 221.1 151 74.2
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 3.8e-55 219.2 153 69.3
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 6.5e-55 218.4 215 58.1
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.4e-54 217.2 151 70.9
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.5e-54 216.5 224 56.2
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 2.5e-54 216.5 168 66.7
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 5.5e-54 215.3 243 51.4
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 9.4e-54 214.5 235 52.3
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 9.4e-54 214.5 208 54.8
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.2e-53 214.2 204 55.9
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.1e-53 213.4 223 54.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.1e-53 213.4 220 54.1
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.1e-53 213.4 220 54.1
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 2.7e-53 213.0 251 49.8
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.7e-53 213.0 223 53.8
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 3.6e-53 212.6 208 55.8
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.6e-53 212.6 243 51.0
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.6e-53 212.6 220 50.9
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 7.9e-53 211.5 220 54.1
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.0e-52 211.1 215 55.8
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.4e-52 210.7 220 54.5
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.4e-52 210.7 220 53.6
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-52 210.3 220 54.5
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 5.1e-52 208.8 214 52.8
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 6.7e-52 208.4 227 49.3
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 7.4e-51 204.9 220 51.4
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 9.7e-51 204.5 150 68.0
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 4.5e-48 195.7 262 45.8
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 1.7e-47 193.7 263 45.6
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 7.2e-46 188.3 222 49.1
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.0e-44 184.5 221 46.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.4e-44 184.1 162 59.9
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.2e-42 176.8 155 55.5
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 3.1e-41 172.9 204 53.9
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.5e-40 170.6 235 45.1
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.5e-40 170.6 153 58.2
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 2.0e-40 170.2 214 50.0
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 2.6e-40 169.9 169 56.8
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.0e-39 167.9 155 58.7
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.5e-35 154.1 119 67.2
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 2.6e-35 153.3 103 69.9
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 7.4e-35 151.8 204 50.5
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 3.7e-34 149.4 155 51.6
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 9.1e-33 144.8 229 38.4
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 5.9e-32 142.1 130 57.7
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.3e-31 141.0 173 39.9
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 6.5e-31 138.7 199 38.2
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.1e-29 133.7 219 40.6
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.0e-28 131.3 193 43.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 6.3e-26 122.1 114 58.8
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 1.1e-25 121.3 159 47.2
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.1e-25 121.3 152 42.1
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.2e-21 107.8 141 49.6
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 8.0e-21 105.1 175 36.0
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 9.1e-17 91.7 62 72.6
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 2.7e-16 90.1 172 34.9
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 6.6e-15 85.5 154 33.1
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 4.7e-13 79.3 52 73.1
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.6e-11 73.6 79 45.6


User provided reference genes

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