Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 9.9e-150 533.5 281 100.0
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 5.0e-93 345.1 269 68.4
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 6.5e-93 344.7 246 72.4
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 6.5e-93 344.7 246 72.4
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 8.5e-93 344.4 269 68.0
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 8.5e-93 344.4 268 69.8
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 2.5e-92 342.8 269 67.7
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.6e-91 340.1 268 67.9
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.6e-91 339.0 265 68.7
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 4.7e-91 338.6 268 69.0
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 5.2e-90 335.1 268 67.2
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.4e-89 332.0 268 66.4
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 1.3e-88 330.5 244 70.9
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 6.3e-88 328.2 268 65.3
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 1.4e-87 327.0 245 70.6
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 1.8e-87 326.6 269 66.9
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 5.3e-87 325.1 268 66.8
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 9.1e-87 324.3 266 66.2
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 2.6e-86 322.8 268 67.2
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 1.3e-85 320.5 279 64.9
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.7e-85 320.1 262 65.6
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 1.7e-85 320.1 323 56.7
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 2.2e-85 319.7 239 70.3
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 3.2e-84 315.8 262 68.7
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 5.5e-84 315.1 248 69.8
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 1.2e-83 313.9 269 64.7
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 3.6e-83 312.4 247 68.8
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 6.1e-83 311.6 289 59.5
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 1.4e-82 310.5 259 64.9
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 4.4e-81 305.4 253 66.0
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 5.7e-81 305.1 243 67.1
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 1.7e-80 303.5 260 64.6
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 1.1e-79 300.8 248 64.9
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 1.8e-79 300.1 270 61.9
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 2.4e-79 299.7 271 63.8
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 2.4e-79 299.7 267 64.0
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 3.1e-79 299.3 269 62.1
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 5.3e-79 298.5 270 61.5
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 5.3e-79 298.5 244 65.2
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 9.1e-79 297.7 267 63.3
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 9.1e-79 297.7 244 64.8
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 1.2e-78 297.4 222 69.4
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 1.2e-78 297.4 270 61.5
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 1.2e-78 297.4 277 62.1
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 2.7e-78 296.2 249 63.9
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 3.5e-78 295.8 243 65.4
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 2.9e-77 292.7 269 62.1
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 6.5e-77 291.6 269 63.6
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 1.1e-76 290.8 257 61.9
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 1.5e-76 290.4 274 60.2
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 1.5e-76 290.4 268 62.3
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 1.5e-76 290.4 243 65.0
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 1.5e-76 290.4 219 69.9
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 2.5e-76 289.7 235 66.0
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 1.2e-75 287.3 265 61.1
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 3.6e-75 285.8 238 67.2
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 4.0e-74 282.3 257 61.1
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 8.8e-74 281.2 271 60.1
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 4.4e-73 278.9 219 68.5
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 1.7e-72 276.9 246 63.8
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 2.2e-72 276.6 263 57.4
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 2.2e-72 276.6 270 62.6
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 2.2e-72 276.6 267 58.4
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 8.3e-72 274.6 257 58.8
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 4.1e-71 272.3 297 54.5
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 1.2e-70 270.8 236 63.1
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 2.0e-70 270.0 236 63.6
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 1.3e-69 267.3 256 59.4
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.3e-69 266.5 256 58.6
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.5e-68 263.1 256 59.0
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 2.8e-67 259.6 265 58.1
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 2.8e-64 249.6 270 54.4
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 6.3e-64 248.4 288 53.5
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 1.4e-63 247.3 264 55.3
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 1.8e-63 246.9 269 57.2
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.7e-62 243.0 220 61.8
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 5.0e-61 238.8 276 54.7
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 6.6e-61 238.4 236 58.9
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 8.6e-61 238.0 250 58.0
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 7.3e-60 235.0 188 65.4
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 2.8e-59 233.0 421 40.6
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.4e-58 230.7 267 56.6
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 4.0e-58 229.2 188 67.0
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 1.5e-57 227.3 271 53.9
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 4.4e-57 225.7 289 48.4
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 9.8e-57 224.6 289 48.1
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 1.7e-56 223.8 249 55.0
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 3.7e-56 222.6 247 55.9
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 2.4e-55 219.9 265 53.6
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 3.2e-55 219.5 193 64.2
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 1.6e-54 217.2 178 67.4
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 2.0e-54 216.9 261 50.6
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 2.0e-54 216.9 210 58.1
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 3.5e-54 216.1 204 59.3
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 6.0e-54 215.3 267 53.2
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 1.0e-53 214.5 268 53.4
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 1.3e-53 214.2 205 58.5
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 3.3e-52 209.5 265 50.9
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 5.6e-52 208.8 221 55.7
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 7.3e-52 208.4 197 61.4
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.2e-51 207.6 221 56.1
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.1e-51 206.8 188 61.2
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 3.6e-51 206.1 262 54.2
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 3.6e-51 206.1 262 54.2
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 8.0e-51 204.9 268 51.5
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 8.0e-51 204.9 268 51.5
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 8.0e-51 204.9 268 51.5
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 5.4e-47 192.2 197 57.4
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.6e-46 190.7 244 52.0
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 5.6e-44 182.2 250 48.4
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 1.1e-42 177.9 266 44.4
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 3.4e-41 172.9 311 42.8
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 4.4e-41 172.6 174 58.0
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 2.7e-38 163.3 182 52.2
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 5.1e-37 159.1 249 44.6
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 5.6e-36 155.6 162 60.5
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 1.1e-28 131.3 151 53.6
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.6e-27 127.5 140 56.4
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 4.4e-25 119.4 127 55.9
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 6.4e-24 115.5 231 41.1
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 4.2e-23 112.8 159 48.4
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 1.0e-21 108.2 230 41.7
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 1.5e-20 104.4 206 41.3
RcHm_v2.0_Chr7g0241891 Rosa chinensis HOM05D006128 ORTHO05D007466 3.3e-20 103.2 54 88.9
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 2.7e-14 83.6 151 43.0
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 1.0e-13 81.6 74 59.5
Oeu047380.1 Olea europaea HOM05D006128 ORTHO05D007466 3.9e-13 79.7 79 53.2
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 4.3e-12 76.3 93 49.5
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.1e-10 71.6 151 42.4
CARHR290830 Cardamine hirsuta HOM05D006128 ORTHO05D007466 2.9e-08 63.5 97 45.4
C03p38050 Brassica napus HOM05D006128 ORTHO05D007466 1.4e-07 61.2 50 62.0
BolC3t16090H Brassica oleracea HOM05D006128 ORTHO05D007466 2.7e-06 57.0 45 62.2


User provided reference genes

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