Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 0.0e+00 1216.1 636 100.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 8.6e-218 760.8 638 65.5
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 7.3e-217 757.7 638 67.6
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 8.3e-213 744.2 633 65.4
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 3.9e-210 735.3 576 69.3
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 6.2e-208 728.0 653 63.6
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 1.3e-202 710.3 622 64.8
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.7e-202 709.9 537 70.9
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.3e-202 709.5 545 69.7
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 6.6e-202 708.0 635 63.0
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.9e-201 706.4 713 60.0
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.9e-201 706.4 642 62.3
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.9e-201 706.4 540 70.0
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.6e-201 704.9 606 64.0
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 9.6e-201 704.1 645 61.9
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.1e-200 703.0 538 70.3
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.2e-200 701.4 617 64.2
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 5.2e-199 698.4 668 60.0
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 2.3e-194 682.9 588 65.0
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 3.3e-193 679.1 650 62.2
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 5.6e-193 678.3 641 60.5
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 9.6e-193 677.6 645 60.6
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 6.2e-192 674.9 639 60.3
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 8.1e-192 674.5 643 61.4
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 4.0e-191 672.2 641 60.1
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 5.3e-191 671.8 638 59.7
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 9.0e-191 671.0 642 60.1
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 2.6e-190 669.5 636 60.2
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.7e-189 666.8 641 60.2
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 3.8e-189 665.6 640 60.9
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 4.9e-189 665.2 638 60.0
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 6.4e-189 664.8 634 59.5
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 6.4e-189 664.8 604 61.1
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 8.4e-189 664.5 642 59.7
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 1.4e-188 663.7 638 59.6
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.9e-188 663.3 541 67.1
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 2.4e-188 662.9 638 59.1
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 3.2e-188 662.5 641 59.1
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 3.2e-188 662.5 537 65.5
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 9.3e-188 661.0 637 60.0
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 2.1e-187 659.8 642 59.5
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.6e-187 658.7 637 61.2
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.0e-186 657.5 636 59.3
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.3e-186 657.1 594 60.9
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.3e-186 657.1 639 59.6
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 1.7e-186 656.8 639 59.0
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 2.3e-186 656.4 642 60.0
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 4.3e-185 652.1 647 58.7
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 7.4e-185 651.4 537 64.4
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 7.4e-185 651.4 598 61.9
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 2.8e-184 649.4 643 58.3
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.8e-183 646.7 568 61.1
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 3.1e-183 646.0 636 59.4
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 3.1e-183 646.0 541 65.6
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 5.3e-183 645.2 608 60.0
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 6.9e-183 644.8 636 59.0
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 9.0e-183 644.4 577 61.7
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 1.2e-182 644.0 543 64.6
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.2e-182 644.0 588 62.1
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 2.6e-182 642.9 633 58.3
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.7e-181 640.2 538 65.1
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 8.4e-181 637.9 528 62.7
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 1.1e-180 637.5 542 63.7
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.4e-180 637.1 627 59.2
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 4.2e-180 635.6 546 64.3
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 9.3e-180 634.4 654 56.7
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 1.0e-178 630.9 539 63.8
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 3.9e-178 629.0 543 63.2
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 8.7e-178 627.9 650 58.9
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 9.6e-177 624.4 643 56.6
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 2.0e-174 616.7 543 62.1
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 3.2e-172 609.4 633 55.3
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 5.5e-172 608.6 589 61.0
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.2e-171 607.4 546 62.8
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 2.1e-171 606.7 643 56.9
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 5.3e-167 592.0 642 55.1
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 5.9e-166 588.6 540 60.2
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 5.0e-157 558.9 466 65.5
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.1e-153 547.7 584 57.4
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 1.1e-153 547.7 650 53.1
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 5.5e-148 528.9 566 57.4
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 6.1e-147 525.4 573 54.1
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.4e-138 497.7 604 50.3
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 5.2e-138 495.7 463 59.6
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 2.7e-134 483.4 481 60.5
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.4e-122 444.5 564 48.2
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.2e-121 441.4 487 58.1
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.2e-118 431.4 422 60.7
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.2e-118 431.4 453 57.2
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 5.6e-116 422.5 553 46.5
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 8.3e-112 408.7 416 57.7
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.6e-107 394.4 422 56.6
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 1.5e-105 387.9 422 55.9
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 5.4e-103 379.4 313 62.9
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 2.9e-88 330.5 444 46.6
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.4e-82 311.6 403 46.9
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.3e-69 268.5 624 34.1
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 3.4e-57 227.3 327 49.2
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.0e-56 225.7 173 69.4
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 3.6e-46 190.7 511 30.7
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.4e-39 166.0 141 62.4
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 9.7e-36 156.0 135 61.5
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 4.2e-31 140.6 98 73.5
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.7e-30 137.9 97 66.0
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 6.1e-30 136.7 116 62.1
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.4e-29 135.6 136 51.5
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 3.0e-29 134.4 329 30.1
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 8.8e-29 132.9 162 46.3
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 9.1e-18 96.3 48 91.7
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 1.3e-16 92.4 118 48.3
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 2.2e-16 91.7 92 54.3
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.9e-16 91.3 118 47.5
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 5.2e-13 80.5 190 31.6
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 8.6e-08 63.2 88 47.7


User provided reference genes

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