Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 7.7e-100 367.1 176 100.0
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 1.8e-56 223.0 179 63.7
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.2e-55 220.3 171 63.2
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 1.2e-55 220.3 172 68.6
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 1.5e-55 219.9 177 67.8
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 7.5e-55 217.6 174 63.8
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 7.5e-55 217.6 175 64.6
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 9.8e-55 217.2 185 60.0
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 6.4e-54 214.5 174 62.6
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 1.1e-53 213.8 183 61.2
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 1.4e-53 213.4 175 62.9
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 2.4e-53 212.6 169 62.7
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 3.2e-53 212.2 175 65.1
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 4.1e-53 211.8 171 64.3
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 4.1e-53 211.8 175 64.6
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 7.0e-53 211.1 174 62.1
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 9.2e-53 210.7 186 63.4
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 9.2e-53 210.7 171 62.0
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 1.2e-52 210.3 175 63.4
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 2.0e-52 209.5 174 62.6
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 4.6e-52 208.4 177 64.4
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 5.9e-52 208.0 173 61.8
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 7.8e-52 207.6 175 62.3
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 1.0e-51 207.2 171 62.0
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 3.0e-51 205.7 173 63.6
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 3.9e-51 205.3 168 62.5
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 3.9e-51 205.3 171 62.6
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 3.9e-51 205.3 177 62.7
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 3.9e-51 205.3 174 61.5
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 5.0e-51 204.9 171 62.0
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 5.0e-51 204.9 175 63.4
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 5.0e-51 204.9 171 62.0
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 6.6e-51 204.5 176 61.9
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 1.5e-50 203.4 174 60.9
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 4.3e-50 201.8 171 64.9
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 4.3e-50 201.8 169 62.1
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 5.6e-50 201.4 169 59.8
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 7.3e-50 201.1 172 64.0
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 9.5e-50 200.7 178 59.0
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 9.5e-50 200.7 174 60.3
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 9.5e-50 200.7 178 60.7
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 1.6e-49 199.9 172 63.4
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 2.8e-49 199.1 173 61.8
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 3.6e-49 198.7 169 56.2
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 4.7e-49 198.4 169 59.2
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 4.7e-49 198.4 169 62.7
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 4.7e-49 198.4 174 58.0
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 6.2e-49 198.0 175 60.0
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 8.0e-49 197.6 175 57.7
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.1e-48 197.2 172 58.7
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 1.4e-48 196.8 184 58.2
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 1.4e-48 196.8 171 60.2
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 1.8e-48 196.4 174 59.2
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 2.3e-48 196.1 184 58.2
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 3.1e-48 195.7 184 57.6
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 5.2e-48 194.9 172 59.3
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 8.9e-48 194.1 168 58.9
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 8.9e-48 194.1 168 58.3
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 1.2e-47 193.7 168 58.9
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 3.4e-47 192.2 190 53.7
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 4.4e-47 191.8 173 59.5
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 4.4e-47 191.8 168 57.1
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 3.7e-46 188.7 172 59.9
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 6.4e-46 188.0 170 57.1
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 1.4e-45 186.8 172 57.6
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 1.9e-45 186.4 169 56.2
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 2.4e-45 186.0 153 65.4
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 4.1e-45 185.3 175 56.0
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 4.1e-45 185.3 153 66.0
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 5.4e-45 184.9 168 58.9
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 7.0e-45 184.5 150 64.0
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 1.2e-44 183.7 170 55.3
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 1.2e-44 183.7 168 57.1
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 4.6e-44 181.8 169 57.4
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 6.0e-44 181.4 172 56.4
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 6.0e-44 181.4 184 51.6
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 7.8e-44 181.0 217 47.5
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 7.8e-44 181.0 169 56.2
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 1.7e-43 179.9 168 57.1
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 3.9e-43 178.7 168 57.1
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 3.3e-42 175.6 121 65.3
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 5.6e-42 174.9 174 53.4
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 2.1e-41 172.9 154 61.7
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 3.1e-40 169.1 171 55.0
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 9.9e-39 164.1 106 72.6
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 1.7e-38 163.3 106 71.7
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 1.4e-37 160.2 121 59.5
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 1.9e-37 159.8 155 52.9
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 3.2e-37 159.1 213 43.7
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 2.1e-36 156.4 109 67.9
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 2.3e-35 152.9 121 57.9
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 2.3e-35 152.9 121 57.9
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 5.1e-35 151.8 175 52.6
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 7.3e-34 147.9 202 47.5
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.6e-33 146.7 203 47.3
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 5.2e-32 141.7 287 33.1
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 7.6e-31 137.9 133 56.4
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 7.8e-28 127.9 97 66.0
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 3.9e-27 125.6 169 46.7
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 1.2e-25 120.6 94 64.9
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 6.9e-24 114.8 106 55.7
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 2.4e-21 106.3 154 42.2
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 4.2e-21 105.5 59 83.1
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 1.6e-20 103.6 74 70.3
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 4.3e-18 95.5 110 40.9
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 1.3e-17 94.0 88 52.3
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 3.4e-15 85.9 60 66.7
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 3.0e-11 72.8 51 68.6
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 4.8e-09 65.5 36 77.8
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 1.1e-08 64.3 104 41.3
CSS0046926 Camellia sinensis var. sinensis HOM05D002397 ORTHO05D002667 2.0e-07 60.1 136 30.1
ATR0307G077 Amborella trichopoda HOM05D002397 ORTHO05D002667 5.8e-07 58.5 159 26.4
TAR629G2980 Trochodendron aralioides HOM05D002397 ORTHO05D002667 5.8e-07 58.5 138 29.0
Prupe.4G113300 Prunus persica HOM05D002397 ORTHO05D002667 1.3e-06 57.4 132 30.3
Sc19g0007740 Simmondsia chinensis HOM05D002397 ORTHO05D002667 2.2e-06 56.6 159 27.0
Solyc02g068700.3 Solanum lycopersicum HOM05D002397 ORTHO05D002667 2.2e-06 56.6 144 29.2
Atru.chr8.926 Acer truncatum HOM05D002397 ORTHO05D002667 2.9e-06 56.2 161 26.7
CBR_g50359 Chara braunii HOM05D002397 ORTHO05D002667 2.9e-06 56.2 115 32.2
Cre06.g273000 Chlamydomonas reinhardtii HOM05D002397 ORTHO05D002667 2.9e-06 56.2 114 34.2
Duzib052G0791 Durio zibethinus HOM05D002397 ORTHO05D002667 2.9e-06 56.2 139 30.2
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 2.9e-06 56.2 107 28.0
Psat7g129840 Pisum sativum HOM05D002397 ORTHO05D002667 2.9e-06 56.2 137 27.7
Thecc.02G008600 Theobroma cacao HOM05D002397 ORTHO05D002667 2.9e-06 56.2 139 30.2
CANSAT35G0509 Cannabis sativa HOM05D002397 ORTHO05D002667 3.8e-06 55.8 114 32.5
Migut.J01593 Erythranthe guttata HOM05D002397 ORTHO05D002667 3.8e-06 55.8 169 31.4
Sopen02g017870 Solanum pennellii HOM05D002397 ORTHO05D002667 4.9e-06 55.5 144 28.5
CSS0030347 Camellia sinensis var. sinensis HOM05D002397 ORTHO05D002667 6.4e-06 55.1 146 29.5
Ciclev10013010m.g Citrus clementina HOM05D002397 ORTHO05D002667 6.4e-06 55.1 156 26.3
Dinv25920 Davidia involucrata HOM05D002397 ORTHO05D002667 6.4e-06 55.1 139 28.8
Gohir.A12G046800 Gossypium hirsutum HOM05D002397 ORTHO05D002667 6.4e-06 55.1 139 29.5
Manes.16G056900 Manihot esculenta HOM05D002397 ORTHO05D002667 6.4e-06 55.1 148 28.4
Nitab4.5_0001288g0140 Nicotiana tabacum HOM05D002397 ORTHO05D002667 6.4e-06 55.1 137 29.2
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 6.4e-06 55.1 147 25.2
CAN.G149.10 Capsicum annuum HOM05D002397 ORTHO05D002667 8.4e-06 54.7 152 27.6
COL.COLO4_17651 Corchorus olitorius HOM05D002397 ORTHO05D002667 8.4e-06 54.7 139 30.9
Peaxi162Scf00149g00222 Petunia axillaris HOM05D002397 ORTHO05D002667 8.4e-06 54.7 136 29.4


User provided reference genes

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