Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 9.7e-55 216.5 102 100.0
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 3.0e-40 168.3 95 85.3
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 5.4e-29 131.0 104 63.5
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 7.0e-29 130.6 101 68.3
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 1.2e-28 129.8 102 62.7
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 3.5e-28 128.3 102 62.7
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 4.5e-28 127.9 97 66.0
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 6.5e-27 124.0 102 61.8
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 4.2e-26 121.3 103 62.1
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 5.5e-26 120.9 98 64.3
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 7.2e-26 120.6 100 61.0
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 9.5e-26 120.2 102 55.9
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 1.6e-25 119.4 102 59.8
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 2.8e-25 118.6 101 60.4
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 2.8e-25 118.6 98 63.3
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 3.6e-25 118.2 99 58.6
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 1.8e-24 115.9 101 58.4
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 4.0e-24 114.8 91 65.9
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 1.2e-23 113.2 100 57.0
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 3.4e-23 111.7 92 64.1
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 4.4e-23 111.3 105 58.1
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 7.5e-23 110.5 93 59.1
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 9.8e-23 110.2 87 65.5
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 2.8e-22 108.6 98 57.1
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 2.8e-22 108.6 102 52.0
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 2.8e-22 108.6 102 52.0
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 2.8e-22 108.6 85 63.5
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 8.3e-22 107.1 102 52.0
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 5.4e-21 104.4 100 56.0
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 7.0e-21 104.0 97 57.7
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 1.2e-20 103.2 92 56.5
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.6e-20 102.8 99 56.6
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 4.5e-20 101.3 100 53.0
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 5.9e-20 100.9 99 51.5
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 1.0e-19 100.1 105 49.5
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 1.0e-19 100.1 89 58.4
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 1.0e-19 100.1 85 60.0
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 2.3e-19 99.0 97 53.6
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 6.6e-19 97.4 110 50.9
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 1.9e-18 95.9 98 51.0
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 3.3e-18 95.1 96 54.2
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 4.3e-18 94.7 85 58.8
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 3.6e-17 91.7 108 47.2
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 4.7e-17 91.3 105 45.7
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 4.7e-17 91.3 98 45.9
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 6.1e-17 90.9 84 52.4
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 6.1e-17 90.9 80 56.2
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 6.1e-17 90.9 80 56.2
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 8.0e-17 90.5 88 53.4
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 1.0e-16 90.1 85 60.0
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 1.4e-16 89.7 98 46.9
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.5e-15 86.3 89 52.8
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 2.6e-15 85.5 86 50.0
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 5.8e-15 84.3 80 53.8
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 7.5e-15 84.0 87 47.1
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 2.9e-14 82.0 84 50.0
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 3.7e-14 81.6 90 47.8
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 6.4e-14 80.9 86 47.7
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.1e-13 80.1 80 52.5
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 1.8e-13 79.3 85 49.4
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 4.1e-13 78.2 80 52.5
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 5.4e-13 77.8 82 50.0
Potri.017G037400 Populus trichocarpa HOM05D008139 ORTHO05D009872 1.2e-12 76.6 66 63.6
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 2.7e-12 75.5 88 46.6
THA.LOC104816105 Tarenaya hassleriana HOM05D011011 ORTHO05D009872 4.6e-12 74.7 99 42.4
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 4.3e-10 68.2 84 40.5
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 4.3e-10 68.2 84 40.5
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 9.5e-10 67.0 84 41.7
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 6.2e-09 64.3 86 40.7
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 8.0e-09 63.9 86 40.7
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 1.8e-08 62.8 86 39.5
TAR626G1168 Trochodendron aralioides HOM05D008139 ORTHO05D009872 3.1e-08 62.0 88 44.3
AL4G27740 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 8.9e-08 60.5 84 39.3
BcaB06g28588 Brassica carinata HOM05D011011 ORTHO05D009872 8.9e-08 60.5 84 39.3
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 8.9e-08 60.5 81 38.3
A03p18150 Brassica napus HOM05D011011 ORTHO05D009872 1.5e-07 59.7 84 36.9
BraA03t11075Z Brassica rapa HOM05D011011 ORTHO05D009872 1.5e-07 59.7 84 36.9
Carub.0004s1371 Capsella rubella HOM05D011011 ORTHO05D009872 1.5e-07 59.7 81 43.2
AT2G32360 Arabidopsis thaliana HOM05D011011 ORTHO05D009872 2.6e-07 58.9 84 38.1
Sp4g14730 Schrenkiella parvula HOM05D011011 ORTHO05D009872 2.6e-07 58.9 84 35.7
AL125U10020 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 4.4e-07 58.2 84 38.1
BcaB01g03982 Brassica carinata HOM05D011011 ORTHO05D009872 4.4e-07 58.2 84 34.5
BcaC01g05908 Brassica carinata HOM05D011011 ORTHO05D009872 4.4e-07 58.2 84 34.5
C03p21180 Brassica napus HOM05D011011 ORTHO05D009872 4.4e-07 58.2 84 34.5
CARHR126180 Cardamine hirsuta HOM05D011011 ORTHO05D009872 4.4e-07 58.2 82 41.5
BolC3t14501H Brassica oleracea HOM05D011011 ORTHO05D009872 5.8e-07 57.8 84 35.7
BcaB01g03981 Brassica carinata HOM05D011011 ORTHO05D009872 1.7e-06 56.2 84 38.1


User provided reference genes

Program Settings