Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.5e-167 592.0 297 100.0
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.9e-107 392.5 301 69.1
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 9.2e-106 387.5 288 72.6
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 9.2e-106 387.5 301 68.1
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 2.1e-105 386.3 243 78.6
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 4.6e-105 385.2 239 80.3
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 2.1e-102 376.3 247 75.7
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.4e-101 373.6 215 84.7
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.8e-101 373.2 259 73.0
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 3.1e-101 372.5 299 66.9
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 3.1e-101 372.5 300 66.3
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 6.9e-101 371.3 224 80.8
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.9e-101 371.3 292 68.2
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.5e-100 370.2 301 65.8
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.0e-100 369.8 224 81.7
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 2.6e-100 369.4 291 68.7
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 5.8e-100 368.2 238 76.5
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 5.8e-100 368.2 215 82.3
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.8e-100 368.2 292 67.1
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 5.8e-100 368.2 235 76.2
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 7.6e-100 367.9 301 65.4
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 7.6e-100 367.9 300 65.7
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 7.6e-100 367.9 294 69.0
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 9.9e-100 367.5 311 63.7
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 9.9e-100 367.5 301 65.8
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.7e-99 366.7 269 70.6
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.4e-99 364.8 281 68.3
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 8.4e-99 364.4 247 73.7
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 3.2e-98 362.5 296 64.5
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 3.5e-97 359.0 297 64.3
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 3.5e-97 359.0 296 63.9
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 7.8e-97 357.8 295 65.1
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.3e-96 356.3 297 65.0
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 3.0e-96 355.9 211 83.4
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 3.0e-96 355.9 293 65.5
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 3.9e-96 355.5 224 78.1
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 5.1e-96 355.1 298 63.1
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 1.1e-95 354.0 213 83.1
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 1.9e-95 353.2 291 63.9
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 2.5e-95 352.8 253 70.4
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.3e-95 352.4 303 63.4
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.3e-95 352.4 298 63.8
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 5.6e-95 351.7 306 62.1
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 7.3e-95 351.3 291 64.3
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 7.3e-95 351.3 294 63.9
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 7.3e-95 351.3 236 73.3
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 2.8e-94 349.4 297 63.6
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 4.8e-94 348.6 295 64.7
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 4.8e-94 348.6 295 64.7
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 4.8e-94 348.6 243 72.0
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 6.2e-94 348.2 297 63.6
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 8.1e-94 347.8 305 61.3
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 8.1e-94 347.8 308 61.4
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 8.1e-94 347.8 283 65.0
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 2.4e-93 346.3 295 64.4
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 4.0e-93 345.5 224 76.3
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.3e-93 345.1 224 76.3
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 6.9e-93 344.7 199 82.9
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 6.9e-93 344.7 260 67.3
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.2e-92 344.0 276 64.9
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.0e-92 343.2 296 62.8
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 2.6e-92 342.8 225 74.7
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 2.2e-91 339.7 234 72.6
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 2.9e-91 339.3 281 66.2
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.9e-90 336.7 285 59.3
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 4.2e-90 335.5 215 74.9
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 3.9e-88 328.9 301 61.5
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 3.9e-88 328.9 284 62.7
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 2.5e-87 326.2 233 70.8
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 9.6e-87 324.3 224 72.8
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 2.8e-86 322.8 260 65.8
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.1e-85 320.9 282 61.7
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.4e-85 320.5 212 71.2
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 1.8e-85 320.1 288 60.4
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 3.1e-85 319.3 289 61.2
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 3.1e-85 319.3 280 61.1
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 5.8e-84 315.1 202 74.8
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.3e-83 313.9 233 66.1
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 8.4e-83 311.2 224 67.0
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 2.7e-81 306.2 281 60.1
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 1.3e-80 303.9 277 59.2
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 5.1e-80 302.0 241 63.9
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 1.5e-79 300.4 220 70.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 6.2e-78 295.0 209 66.5
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.2e-76 290.8 203 70.0
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 7.6e-76 288.1 243 60.1
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 1.3e-75 287.3 254 64.2
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.2e-75 286.6 199 71.4
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 4.9e-75 285.4 179 76.5
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 7.4e-71 271.6 260 60.0
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.6e-70 270.4 172 76.2
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 2.8e-70 269.6 271 55.7
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 4.1e-69 265.8 223 64.1
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 5.3e-69 265.4 187 69.0
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 7.9e-65 251.5 220 60.0
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.3e-63 245.7 233 57.9
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 5.9e-60 235.3 218 59.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.6e-57 227.3 137 81.0
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 4.8e-54 215.7 218 51.8
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 7.0e-45 185.3 149 63.8
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 5.5e-42 175.6 105 79.0
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 2.3e-40 170.2 197 45.7
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 4.1e-37 159.5 94 80.9
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 7.0e-37 158.7 196 42.9
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.3e-35 154.5 170 54.7
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 1.5e-34 151.0 117 62.4
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.7e-33 146.7 83 80.7
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 3.7e-30 136.3 261 34.9
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 9.1e-29 131.7 91 69.2
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 6.6e-27 125.6 91 64.8
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 8.6e-27 125.2 77 76.6
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 3.4e-23 113.2 128 53.1
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 1.6e-20 104.4 70 72.9
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.3e-19 100.5 60 75.0
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.0e-19 99.4 69 66.7
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.0e-16 91.7 59 69.5
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 2.3e-16 90.5 68 64.7
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 3.4e-15 86.7 64 67.2
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.2e-09 68.2 57 61.4
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.7e-06 56.6 63 42.9


User provided reference genes

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