Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.2e-194 682.9 331 100.0
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.7e-170 602.1 328 89.0
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.1e-112 410.6 274 73.4
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.1e-112 410.6 281 70.1
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 2.1e-111 406.4 286 70.3
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 3.7e-111 405.6 246 76.8
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 6.2e-111 404.8 274 70.4
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 3.1e-110 402.5 273 71.8
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 5.3e-110 401.7 267 73.8
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 1.5e-109 400.2 337 60.2
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 3.4e-109 399.1 285 68.8
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 4.5e-109 398.7 230 81.3
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.3e-108 397.1 278 68.3
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 6.5e-108 394.8 289 67.1
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 8.4e-108 394.4 318 63.2
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 3.2e-107 392.5 243 76.1
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.1e-107 391.3 303 63.7
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 9.3e-107 391.0 278 68.0
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.2e-106 390.6 278 67.6
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 3.5e-106 389.0 327 62.7
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 4.6e-106 388.7 278 66.2
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.0e-105 387.5 245 75.1
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.3e-105 387.1 244 75.4
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 5.1e-105 385.2 279 67.0
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.1e-104 384.0 328 61.3
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.1e-104 384.0 275 67.6
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.9e-104 383.3 288 65.3
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 2.5e-104 382.9 308 63.3
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 3.3e-104 382.5 277 69.3
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 3.3e-104 382.5 277 66.4
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 4.3e-104 382.1 245 74.7
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.3e-103 380.6 274 68.6
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 3.7e-103 379.0 300 62.7
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 6.3e-103 378.3 250 70.8
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 6.3e-103 378.3 279 65.6
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 6.3e-103 378.3 274 66.1
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 8.2e-103 377.9 212 81.1
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.1e-102 377.5 245 71.8
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.8e-102 376.7 294 65.3
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 2.4e-102 376.3 308 63.0
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 3.1e-102 375.9 291 63.9
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 3.1e-102 375.9 241 75.1
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 4.1e-102 375.6 287 65.2
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 5.3e-102 375.2 269 69.1
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 6.9e-102 374.8 237 75.9
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 6.9e-102 374.8 214 82.2
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 9.0e-102 374.4 320 62.8
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 9.0e-102 374.4 291 66.0
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 9.0e-102 374.4 299 64.5
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.5e-101 373.6 221 79.6
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 2.0e-101 373.2 221 79.2
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 2.6e-101 372.9 275 67.3
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 3.4e-101 372.5 288 62.8
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 4.5e-101 372.1 219 79.9
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 5.9e-101 371.7 286 65.4
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 5.9e-101 371.7 268 68.3
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 7.6e-101 371.3 256 69.5
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 7.6e-101 371.3 275 66.9
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 7.6e-101 371.3 275 66.9
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.3e-100 370.5 219 79.0
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 1.3e-100 370.5 211 80.6
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 2.2e-100 369.8 240 73.8
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.2e-100 369.8 240 73.8
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.9e-100 369.4 240 73.8
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 3.8e-100 369.0 261 69.7
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 3.8e-100 369.0 210 81.4
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 3.8e-100 369.0 240 73.8
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 3.8e-100 369.0 280 66.1
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 5.0e-100 368.6 282 66.7
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 1.1e-99 367.5 240 75.0
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 1.4e-99 367.1 302 62.6
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.4e-99 367.1 215 79.1
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.4e-99 367.1 219 78.1
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.9e-99 366.7 244 74.2
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 5.5e-99 365.2 270 65.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 5.5e-99 365.2 303 60.7
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 7.2e-99 364.8 219 78.1
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 1.2e-98 364.0 222 77.0
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.2e-98 364.0 231 73.2
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 2.7e-98 362.8 270 66.3
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 2.7e-98 362.8 277 64.3
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 2.7e-98 362.8 277 65.0
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 3.5e-98 362.5 216 77.3
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 4.6e-98 362.1 213 77.5
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 4.6e-98 362.1 311 60.8
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 3.9e-97 359.0 275 65.5
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 3.9e-97 359.0 275 65.5
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 3.9e-97 359.0 232 75.0
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 5.1e-97 358.6 232 73.7
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 5.1e-97 358.6 291 62.2
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 6.7e-97 358.2 220 76.4
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 8.7e-97 357.8 277 65.0
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 8.7e-97 357.8 277 65.0
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 8.7e-97 357.8 271 66.1
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 7.4e-96 354.8 214 73.8
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 9.7e-96 354.4 222 75.7
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 9.7e-96 354.4 276 64.9
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 9.7e-96 354.4 235 71.9
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.6e-95 353.6 262 67.9
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 4.8e-95 352.1 279 62.0
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 1.1e-94 350.9 235 70.2
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.4e-94 349.7 245 68.6
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 9.0e-94 347.8 244 69.3
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 1.2e-93 347.4 219 74.9
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.5e-93 347.1 291 60.1
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 2.9e-92 342.8 296 59.8
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 6.5e-92 341.7 192 80.2
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 9.4e-91 337.8 192 79.2
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.2e-90 337.4 204 75.0
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 5.1e-89 332.0 301 57.5
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.8e-87 326.2 296 55.7
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 4.1e-86 322.4 284 58.8
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.1e-86 322.4 271 59.4
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.1e-86 322.4 220 66.4
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 3.4e-85 319.3 293 56.7
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 7.7e-85 318.2 205 69.8
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 7.2e-83 311.6 213 67.6
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.3e-79 300.8 220 62.7
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 3.8e-76 289.3 160 80.0
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.0e-76 288.9 161 80.1
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 1.6e-74 283.9 201 61.7
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 1.4e-73 280.8 214 65.0
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.0e-73 279.6 162 78.4
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 4.4e-72 275.8 203 62.1
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 5.3e-70 268.9 204 66.7
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.8e-68 262.7 150 78.7
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 3.2e-67 259.6 274 52.6
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 1.5e-64 250.8 143 78.3
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.1e-59 234.6 231 49.8
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 1.3e-55 221.1 121 80.2
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 8.6e-52 208.4 150 66.7
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 5.0e-44 182.6 174 48.3
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.9e-43 180.6 156 57.7
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 7.5e-32 142.1 119 53.8
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 4.9e-23 112.8 86 52.3
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 1.4e-22 111.3 147 46.9
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.8e-18 97.1 73 65.8
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 4.7e-18 96.3 51 88.2
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.2e-16 91.7 85 61.2
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 8.4e-15 85.5 134 41.8
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 2.4e-14 84.0 86 55.8
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 7.1e-14 82.4 180 37.2
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.3e-12 78.2 73 58.9
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 4.5e-08 63.2 35 71.4
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 2.4e-06 57.4 46 63.0


User provided reference genes

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