Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G1601 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 2.8e-153 545.4 315 100.0
TWI63G0214 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 7.0e-120 434.5 313 78.6
Cfa013454 Carpinus fangiana HOM05D003811 ORTHO05D004470 1.7e-89 333.6 334 56.3
Sabra18G0116100 Salix brachista HOM05D003811 ORTHO05D004470 1.5e-82 310.5 376 51.9
CiPaw.07G197300 Carya illinoinensis HOM05D003811 ORTHO05D004470 5.8e-82 308.5 337 54.0
TAR620G0001 Trochodendron aralioides HOM05D003811 ORTHO05D004470 7.6e-82 308.1 317 58.7
Duzib168G0111 Durio zibethinus HOM05D003811 ORTHO05D004470 5.1e-78 295.4 348 50.9
Atru.chr7.754 Acer truncatum HOM05D003811 ORTHO05D004470 7.3e-77 291.6 322 54.7
Atru.chr7.775 Acer truncatum HOM05D003811 ORTHO05D004470 7.3e-77 291.6 322 54.7
Manes.06G019300 Manihot esculenta HOM05D003811 ORTHO05D004470 2.8e-76 289.7 337 50.7
Potri.018G142100 Populus trichocarpa HOM05D003811 ORTHO05D004470 1.2e-74 284.3 389 48.1
Dinv25445 Davidia involucrata HOM05D003811 ORTHO05D004470 9.9e-74 281.2 331 50.2
CSS0000053 Camellia sinensis var. sinensis HOM05D003811 ORTHO05D004470 3.8e-73 279.3 325 50.8
Potri.006G075200 Populus trichocarpa HOM05D003811 ORTHO05D004470 8.4e-73 278.1 373 46.4
Duzib150G1212 Durio zibethinus HOM05D003811 ORTHO05D004470 1.4e-72 277.3 353 51.8
Thecc.09G186300 Theobroma cacao HOM05D003811 ORTHO05D004470 3.2e-72 276.2 342 48.8
Manes.14G159300 Manihot esculenta HOM05D003811 ORTHO05D004470 1.2e-71 274.2 339 51.6
ClCG11G011760 Citrullus lanatus HOM05D003811 ORTHO05D004470 2.7e-71 273.1 357 48.2
MELO3C003975.2 Cucumis melo HOM05D003811 ORTHO05D004470 1.0e-70 271.2 366 48.6
Sabra06G0055900 Salix brachista HOM05D003811 ORTHO05D004470 1.0e-70 271.2 365 47.9
Peaxi162Scf01038g00011 Petunia axillaris HOM05D003811 ORTHO05D004470 1.7e-70 270.4 359 47.1
CsaV3_2G008720 Cucumis sativus L. HOM05D003811 ORTHO05D004470 2.3e-70 270.0 363 51.0
MD16G1248400 Malus domestica HOM05D003811 ORTHO05D004470 3.0e-70 269.6 364 55.2
DCAR_018030 Daucus carota HOM05D003811 ORTHO05D004470 8.7e-70 268.1 337 46.9
Nitab4.5_0000949g0010 Nicotiana tabacum HOM05D003811 ORTHO05D004470 2.5e-69 266.5 357 45.4
Ciclev10008308m.g Citrus clementina HOM05D003811 ORTHO05D004470 3.3e-69 266.2 364 47.5
Nitab4.5_0000491g0080 Nicotiana tabacum HOM05D003811 ORTHO05D004470 5.6e-69 265.4 356 46.3
MD13G1239300 Malus domestica HOM05D003811 ORTHO05D004470 9.6e-69 264.6 364 48.6
Dinv41179 Davidia involucrata HOM05D003811 ORTHO05D004470 6.2e-68 261.9 327 50.8
Nitab4.5_0000949g0020 Nicotiana tabacum HOM05D003811 ORTHO05D004470 6.2e-68 261.9 354 46.0
Oeu018819.1 Olea europaea HOM05D003811 ORTHO05D004470 6.2e-68 261.9 336 47.0
RcHm_v2.0_Chr4g0399481 Rosa chinensis HOM05D003811 ORTHO05D004470 5.3e-67 258.8 349 47.0
Aqoxy7G02811 Aquilegia oxysepala HOM05D003811 ORTHO05D004470 9.0e-67 258.1 346 48.3
MBI13_g34046_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 9.0e-67 258.1 317 49.5
Prupe.1G074900 Prunus persica HOM05D003811 ORTHO05D004470 1.2e-66 257.7 367 53.7
Eucgr.C00112 Eucalyptus grandis HOM05D003811 ORTHO05D004470 2.0e-66 256.9 329 48.9
Nn8g40778 Nelumbo nucifera HOM05D003811 ORTHO05D004470 2.0e-66 256.9 334 55.1
Cc06_g20840 Coffea canephora HOM05D003811 ORTHO05D004470 3.4e-66 256.1 377 45.4
Hma1.2p1_1326F.1_g275850 Hydrangea macrophylla HOM05D003811 ORTHO05D004470 3.4e-66 256.1 328 50.9
PGSC0003DMG400022983 Solanum tuberosum HOM05D003811 ORTHO05D004470 5.8e-66 255.4 364 46.4
Oeu006847.1 Olea europaea HOM05D003811 ORTHO05D004470 1.7e-65 253.8 349 46.1
CAN.G192.5 Capsicum annuum HOM05D003811 ORTHO05D004470 2.2e-65 253.4 359 45.1
Sed0004951 Sechium edule HOM05D003811 ORTHO05D004470 2.2e-65 253.4 347 50.4
Cpa.g.sc95.8 Carica papaya HOM05D003811 ORTHO05D004470 6.4e-65 251.9 369 47.7
FvH4_4g07270 Fragaria vesca HOM05D003811 ORTHO05D004470 6.4e-65 251.9 358 48.0
GSVIVG01010855001 Vitis vinifera HOM05D003811 ORTHO05D004470 6.4e-65 251.9 322 47.5
FAN17G0360 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.1e-64 251.1 361 47.6
FAN22G1182 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.9e-64 250.4 361 46.8
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 3.2e-64 249.6 312 47.4
Migut.L01879 Erythranthe guttata HOM05D003811 ORTHO05D004470 7.1e-64 248.4 329 48.3
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 2.7e-63 246.5 359 47.1
Oeu019552.1 Olea europaea HOM05D003811 ORTHO05D004470 2.7e-63 246.5 350 43.7
Glyma.13G100700 Glycine max HOM05D003811 ORTHO05D004470 7.9e-63 245.0 338 50.9
Sopen07g004460 Solanum pennellii HOM05D003811 ORTHO05D004470 3.9e-62 242.7 362 44.5
Rhsim01G0116800 Rhododendron simsii HOM05D003811 ORTHO05D004470 8.7e-62 241.5 332 43.1
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.5e-61 240.7 359 47.6
Sed0025374 Sechium edule HOM05D003811 ORTHO05D004470 1.5e-61 240.7 327 48.3
VMungo1215G0314 Vigna mungo HOM05D003811 ORTHO05D004470 1.5e-61 240.7 324 46.9
Ca_27932_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 1.9e-61 240.4 336 49.4
Solyc07g008540.3 Solanum lycopersicum HOM05D003811 ORTHO05D004470 3.3e-61 239.6 363 44.1
DCAR_014667 Daucus carota HOM05D003811 ORTHO05D004470 4.3e-61 239.2 314 47.5
vmacro05996 Vaccinium macrocarpon HOM05D003811 ORTHO05D004470 3.7e-60 236.1 349 45.6
Ah.10g036890 Amaranthus hybridus HOM05D003811 ORTHO05D004470 4.8e-60 235.7 362 45.6
Lj4g0014027 Lotus japonicus HOM05D003811 ORTHO05D004470 4.8e-60 235.7 338 47.9
Lalb_Chr07g0180651 Lupinus albus HOM05D003811 ORTHO05D004470 4.8e-60 235.7 321 50.2
Glyma.17G059100 Glycine max HOM05D003811 ORTHO05D004470 8.1e-60 235.0 336 50.0
Psat4g013600 Pisum sativum HOM05D003811 ORTHO05D004470 6.9e-59 231.9 329 48.0
Oeu034800.1 Olea europaea HOM05D003811 ORTHO05D004470 1.2e-58 231.1 345 43.8
Sc10g0001710 Simmondsia chinensis HOM05D003811 ORTHO05D004470 1.2e-58 231.1 349 47.6
Hund13780 Selenicereus undatus HOM05D003811 ORTHO05D004470 1.5e-58 230.7 361 45.7
arahy.Tifrunner.gnm1.ann1.0QJD35 Arachis hypogaea HOM05D003811 ORTHO05D004470 9.9e-58 228.0 355 45.6
MBI16_g05834_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 1.7e-57 227.3 332 47.3
Lalb_Chr13g0299991 Lupinus albus HOM05D003811 ORTHO05D004470 2.9e-57 226.5 325 50.5
Rhsim03G0266200 Rhododendron simsii HOM05D003811 ORTHO05D004470 2.9e-57 226.5 354 44.4
arahy.Tifrunner.gnm1.ann1.YRC4PH Arachis hypogaea HOM05D003811 ORTHO05D004470 1.4e-56 224.2 355 47.0
Lj5C615T3 Lonicera japonica HOM05D003811 ORTHO05D004470 2.4e-56 223.4 360 41.9
Lsat_1_v5_gn_7_56240 Lactuca sativa HOM05D003811 ORTHO05D004470 5.5e-56 222.2 355 42.5
Medtr4g127420 Medicago truncatula HOM05D003811 ORTHO05D004470 5.5e-56 222.2 329 49.2
QL02p046940 Quercus lobata HOM05D003811 ORTHO05D004470 9.3e-56 221.5 358 47.2
COL.COLO4_07099 Corchorus olitorius HOM05D003811 ORTHO05D004470 2.7e-55 219.9 357 49.3
Migut.J00797 Erythranthe guttata HOM05D003811 ORTHO05D004470 1.0e-54 218.0 353 43.9
EL10Ac2g04726 Beta vulgaris HOM05D003811 ORTHO05D004470 2.3e-54 216.9 366 47.3
MSTRG.10438 Avicennia marina HOM05D003811 ORTHO05D004470 3.0e-54 216.5 334 42.5
AUR62040721 Chenopodium quinoa HOM05D003811 ORTHO05D004470 3.9e-54 216.1 353 43.9
AUR62012114 Chenopodium quinoa HOM05D003811 ORTHO05D004470 8.7e-54 214.9 346 43.4
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 1.9e-53 213.8 376 45.5
FvH4_6g24780 Fragaria vesca HOM05D003811 ORTHO05D004470 4.3e-53 212.6 361 42.4
FAN02G0923 Fragaria x ananassa HOM05D003811 ORTHO05D004470 4.3e-53 212.6 357 41.5
Phvul.003G141200 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 9.6e-53 211.5 323 45.5
MSTRG.26548 Avicennia marina HOM05D003811 ORTHO05D004470 1.6e-52 210.7 342 42.1
TPR.G32975 Trifolium pratense HOM05D003811 ORTHO05D004470 2.1e-52 210.3 334 46.1
Hund16072 Selenicereus undatus HOM05D003811 ORTHO05D004470 2.8e-52 209.9 379 42.7
Gohir.A05G002200 Gossypium hirsutum HOM05D003811 ORTHO05D004470 6.2e-52 208.8 327 45.6
Gohir.D05G002600 Gossypium hirsutum HOM05D003811 ORTHO05D004470 2.4e-51 206.8 328 45.1
Lalb_Chr12g0199621 Lupinus albus HOM05D003811 ORTHO05D004470 2.4e-51 206.8 323 44.3
HanXRQChr09g0245431 Helianthus annuus HOM05D003811 ORTHO05D004470 4.0e-51 206.1 380 39.2
CiPaw.08G032400 Carya illinoinensis HOM05D003811 ORTHO05D004470 1.3e-49 201.1 328 41.2
HanXRQChr03g0065501 Helianthus annuus HOM05D003811 ORTHO05D004470 1.7e-49 200.7 413 36.8
Gorai.009G002400 Gossypium raimondii HOM05D003811 ORTHO05D004470 3.8e-49 199.5 328 44.2
Lsat_1_v5_gn_8_69001 Lactuca sativa HOM05D003811 ORTHO05D004470 3.8e-49 199.5 316 43.4
PSO170G1122 Papaver somniferum HOM05D003811 ORTHO05D004470 6.5e-49 198.7 342 42.7
Lj5C612T1 Lonicera japonica HOM05D003811 ORTHO05D004470 1.9e-48 197.2 350 39.7
PSO063G0992 Papaver somniferum HOM05D003811 ORTHO05D004470 7.1e-48 195.3 345 42.3
Lsat_1_v5_gn_5_83141 Lactuca sativa HOM05D003811 ORTHO05D004470 2.1e-47 193.7 343 46.6
PGR001G0001 Punica granatum HOM05D003811 ORTHO05D004470 2.1e-47 193.7 331 45.3
SalBow5G4432 Salvia bowleyana HOM05D003811 ORTHO05D004470 2.7e-47 193.4 324 42.3
Eucgr.C02219 Eucalyptus grandis HOM05D003811 ORTHO05D004470 1.3e-46 191.0 335 39.1
SalBow5G0957 Salvia bowleyana HOM05D003811 ORTHO05D004470 1.3e-46 191.0 324 42.0
CDE06G2566 Ceratophyllum demersum HOM05D003811 ORTHO05D004470 7.4e-45 185.3 306 39.9
C01p21610 Brassica napus HOM05D003811 ORTHO05D004470 4.1e-43 179.5 341 37.2
BolC1t02080H Brassica oleracea HOM05D003811 ORTHO05D004470 4.1e-43 179.5 341 37.2
BcaC09g50723 Brassica carinata HOM05D003811 ORTHO05D004470 4.5e-42 176.0 341 37.0
ECA240G2391 Erigeron canadensis HOM05D003811 ORTHO05D004470 4.5e-42 176.0 348 39.4
Sp6g18910 Schrenkiella parvula HOM05D003811 ORTHO05D004470 1.3e-41 174.5 386 35.2
Thhalv10025322m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 2.9e-41 173.3 354 36.7
Thhalv10013517m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 2.5e-40 170.2 373 35.9
AT4G25990 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 7.2e-40 168.7 338 39.1
AL7G27010 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 4.6e-39 166.0 339 38.3
Aa31LG3G13080 Aethionema arabicum HOM05D003811 ORTHO05D004470 6.1e-39 165.6 394 33.8
BraA01t01681Z Brassica rapa HOM05D003811 ORTHO05D004470 2.3e-38 163.7 337 36.5
A01p17250 Brassica napus HOM05D003811 ORTHO05D004470 8.8e-38 161.8 337 36.5
Carub.0007s1496 Capsella rubella HOM05D003811 ORTHO05D004470 5.7e-37 159.1 344 36.9
CARHR233500 Cardamine hirsuta HOM05D003811 ORTHO05D004470 1.7e-36 157.5 329 39.8
HanXRQChr10g0308851 Helianthus annuus HOM05D003811 ORTHO05D004470 2.8e-36 156.8 346 38.2
BraA02t05937Z Brassica rapa HOM05D003811 ORTHO05D004470 6.3e-36 155.6 338 42.0
unitig_8.g4051 Utricularia gibba HOM05D003811 ORTHO05D004470 5.3e-35 152.5 247 43.3
BcaB05g22326 Brassica carinata HOM05D003811 ORTHO05D004470 9.1e-35 151.8 359 37.0
A02p08670 Brassica napus HOM05D003811 ORTHO05D004470 2.6e-34 150.2 334 41.3
BcaNung03775 Brassica carinata HOM05D003811 ORTHO05D004470 4.5e-34 149.4 338 38.8
BcaC03g14176 Brassica carinata HOM05D003811 ORTHO05D004470 5.9e-34 149.1 330 40.6
A10p14570 Brassica napus HOM05D003811 ORTHO05D004470 5.9e-34 149.1 300 42.0
C02p14510 Brassica napus HOM05D003811 ORTHO05D004470 5.9e-34 149.1 330 40.6
BolC2t07575H Brassica oleracea HOM05D003811 ORTHO05D004470 5.9e-34 149.1 330 40.6
SGA_v2.0_scaffold31G12764 Striga asiatica HOM05D003811 ORTHO05D004470 5.9e-34 149.1 353 42.5
BcaC06g32778 Brassica carinata HOM05D003811 ORTHO05D004470 1.0e-33 148.3 331 38.1
AT5G57180 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 1.3e-33 147.9 377 34.2
Glyma.09G059800 Glycine max HOM05D003811 ORTHO05D004470 1.3e-33 147.9 324 37.7
BolC9t57752H Brassica oleracea HOM05D003811 ORTHO05D004470 3.8e-33 146.4 306 38.9
Glyma.15G166500 Glycine max HOM05D003811 ORTHO05D004470 5.0e-33 146.0 301 40.5
C09p49010 Brassica napus HOM05D003811 ORTHO05D004470 1.9e-32 144.1 316 37.7
BraA10t43544Z Brassica rapa HOM05D003811 ORTHO05D004470 4.2e-32 142.9 300 40.7
BcaB08g36076 Brassica carinata HOM05D003811 ORTHO05D004470 1.2e-31 141.4 317 37.5
BcaC04g19992 Brassica carinata HOM05D003811 ORTHO05D004470 2.1e-31 140.6 306 39.2
AL8G33110 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 6.1e-31 139.0 379 34.0
BraA03t14705Z Brassica rapa HOM05D003811 ORTHO05D004470 7.9e-31 138.7 334 38.0
Sp7g24010 Schrenkiella parvula HOM05D003811 ORTHO05D004470 1.4e-30 137.9 248 40.3
unitig_22.g5159 Utricularia gibba HOM05D003811 ORTHO05D004470 3.9e-30 136.3 250 40.8
CARHR270970 Cardamine hirsuta HOM05D003811 ORTHO05D004470 5.1e-30 136.0 380 32.1
HPP92_010287 Vanilla planifolia HOM05D003811 ORTHO05D004470 8.8e-30 135.2 335 38.2
BolC7t45947H Brassica oleracea HOM05D003811 ORTHO05D004470 5.7e-29 132.5 344 32.3
HanXRQChr05g0141071 Helianthus annuus HOM05D003811 ORTHO05D004470 9.7e-29 131.7 312 35.9
C07p54590 Brassica napus HOM05D003811 ORTHO05D004470 1.1e-27 128.3 344 31.7
Phvul.009G236100 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 1.4e-27 127.9 296 34.1
Carub.0008s1769 Capsella rubella HOM05D003811 ORTHO05D004470 1.8e-27 127.5 379 32.2
A03p56350 Brassica napus HOM05D003811 ORTHO05D004470 2.0e-26 124.0 333 36.3
Ca_02108_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 5.9e-26 122.5 305 38.4
Oeu064847.1 Olea europaea HOM05D003811 ORTHO05D004470 1.9e-24 117.5 113 59.3
HPP92_017127 Vanilla planifolia HOM05D003811 ORTHO05D004470 3.2e-24 116.7 347 34.9
Psat1g144040 Pisum sativum HOM05D003811 ORTHO05D004470 4.2e-24 116.3 311 35.0
Medtr2g038010 Medicago truncatula HOM05D003811 ORTHO05D004470 1.2e-23 114.8 320 34.4
SGA_v2.0_scaffold511G52626 Striga asiatica HOM05D003811 ORTHO05D004470 2.1e-23 114.0 323 33.7
Actinidia38496 Actinidia chinensis HOM05D003811 ORTHO05D004470 8.0e-23 112.1 204 35.8
ECA236G3708 Erigeron canadensis HOM05D003811 ORTHO05D004470 5.2e-22 109.4 246 34.6
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 2.6e-21 107.1 306 33.0
SGA_v2.0_scaffold112G31580 Striga asiatica HOM05D003811 ORTHO05D004470 1.1e-19 101.7 193 44.0
FAN05G5342 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.4e-19 101.3 105 57.1
ECA234G4485 Erigeron canadensis HOM05D003811 ORTHO05D004470 2.2e-17 94.0 183 37.2
ATR0626G357 Amborella trichopoda HOM05D003811 ORTHO05D004470 2.9e-17 93.6 352 27.8
FAN05G4809 Fragaria x ananassa HOM05D003811 ORTHO05D004470 4.2e-16 89.7 196 37.8
Actinidia29953 Actinidia chinensis HOM05D003811 ORTHO05D004470 2.3e-14 84.0 113 38.1
Zm00001eb272980 Zea mays HOM05D018649 ORTHO05D004470 2.2e-12 77.4 369 28.2
Zm00001eb208040 Zea mays HOM05D003811 ORTHO05D004470 2.8e-12 77.0 380 29.5
Zm00001eb226810 Zea mays HOM05D018649 ORTHO05D004470 2.7e-10 70.5 352 25.9
Os02g0148000 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 4.5e-10 69.7 196 31.1
Os06g0699600 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 1.5e-08 64.7 346 28.9
Lsat_1_v5_gn_6_95500 Lactuca sativa HOM05D003811 ORTHO05D004470 3.2e-08 63.5 105 37.1
SEGI_33443 Sequoiadendron giganteum HOM05D001106 ORTHO05D000910 5.5e-08 62.8 346 28.3
FAN24G1311 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.0e-06 57.0 101 34.7
FvH4_2g01490 Fragaria vesca HOM05D003811 ORTHO05D004470 6.8e-06 55.8 101 34.7


User provided reference genes

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