Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 0.0e+00 1425.2 752 100.0
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 5.5e-264 914.4 802 64.8
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.2e-255 886.7 803 63.6
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 3.6e-255 885.2 807 63.1
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 4.8e-252 874.8 845 61.1
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 2.4e-251 872.5 808 62.7
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 5.0e-249 864.8 801 62.4
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.9e-248 862.8 800 61.9
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 9.4e-248 860.5 823 61.0
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.2e-247 860.1 801 62.0
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.0e-246 857.1 754 66.2
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 1.2e-245 853.6 802 62.0
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 5.7e-245 851.3 822 60.6
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 2.2e-244 849.4 829 60.3
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 6.3e-244 847.8 807 60.8
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.4e-243 846.7 807 61.0
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 1.8e-243 846.3 754 64.1
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.8e-243 846.3 808 60.6
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 4.5e-242 841.6 805 60.9
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 2.3e-241 839.3 822 59.2
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 4.2e-240 835.1 787 61.5
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 3.6e-239 832.0 822 59.5
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.0e-238 828.6 785 60.8
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.5e-237 826.6 823 59.2
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.7e-236 823.2 824 58.4
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 7.0e-235 817.8 818 57.8
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.2e-234 817.0 757 61.6
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 2.9e-233 812.4 809 58.5
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.9e-233 812.4 805 57.4
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-232 810.1 789 58.3
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.3e-232 808.9 794 58.9
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 5.6e-232 808.1 797 59.5
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 9.5e-232 807.4 808 58.3
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.8e-231 805.8 777 59.3
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 4.7e-231 805.1 801 58.4
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.4e-230 803.5 755 62.8
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.8e-230 803.1 797 58.6
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.4e-229 798.5 803 57.2
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.9e-228 795.8 782 57.9
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 3.7e-228 795.4 799 57.2
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 3.7e-228 795.4 774 58.7
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 4.9e-228 795.0 791 57.8
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 2.4e-227 792.7 813 56.5
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 5.4e-227 791.6 779 58.5
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 5.4e-227 791.6 808 56.8
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 7.0e-227 791.2 792 57.8
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 9.2e-227 790.8 789 59.4
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.2e-226 790.4 798 58.4
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.0e-226 788.1 796 58.9
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 7.8e-226 787.7 839 57.2
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 2.3e-225 786.2 826 56.7
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.1e-224 783.9 795 57.1
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 4.3e-224 781.9 804 57.1
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 7.3e-224 781.2 801 58.4
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 7.3e-224 781.2 794 57.1
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 3.6e-223 778.9 803 56.4
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 2.3e-222 776.2 789 57.7
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 6.8e-222 774.6 801 56.6
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 2.6e-221 772.7 808 55.4
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 2.6e-221 772.7 816 56.2
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 9.8e-221 770.8 763 60.0
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 3.7e-220 768.8 782 58.7
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 8.3e-220 767.7 799 55.6
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.4e-219 766.9 801 54.9
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.9e-219 766.5 820 55.9
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 7.0e-219 764.6 773 58.9
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 2.0e-218 763.1 782 57.5
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 1.3e-217 760.4 805 56.6
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.5e-216 756.9 791 56.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 5.6e-216 755.0 783 57.1
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.8e-214 750.0 786 54.6
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 2.9e-212 742.7 783 54.8
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 6.4e-212 741.5 794 56.5
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 7.8e-210 734.6 765 55.8
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 8.6e-209 731.1 791 54.1
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.8e-207 726.1 872 52.1
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 6.2e-207 724.9 739 58.3
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 2.6e-205 719.5 813 53.9
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 2.6e-205 719.5 774 55.3
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 7.6e-205 718.0 763 57.3
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-204 717.2 818 54.5
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 8.4e-204 714.5 803 52.7
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 4.1e-203 712.2 800 53.0
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.3e-193 680.6 718 55.4
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.9e-193 679.1 790 50.8
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 6.6e-193 678.3 774 51.9
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.8e-190 670.2 801 51.1
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 4.9e-188 662.1 646 61.5
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 4.8e-183 645.6 802 50.1
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 2.4e-182 643.3 677 55.7
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 3.1e-182 642.9 797 50.7
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.5e-181 640.6 756 51.9
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 9.9e-181 637.9 806 49.6
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.1e-179 634.4 797 49.4
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 2.7e-178 629.8 805 48.8
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 6.0e-178 628.6 802 49.4
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 5.1e-177 625.5 806 49.1
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 2.5e-176 623.2 806 49.0
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 3.4e-173 612.8 793 48.9
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 6.0e-170 602.1 790 48.5
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.3e-169 600.1 801 48.1
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-168 597.8 749 49.5
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-168 597.8 749 49.4
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 9.7e-168 594.7 749 49.4
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.4e-165 586.3 775 48.0
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.4e-161 574.3 905 42.8
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.4e-161 574.3 791 44.6
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.4e-158 564.3 818 43.2
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.1e-154 550.4 802 44.3
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.9e-148 530.0 741 47.1
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 5.5e-147 525.8 600 55.2
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.0e-137 495.0 429 62.5
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 5.2e-137 492.7 638 48.7
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 3.1e-134 483.4 637 46.8
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.0e-132 478.4 704 43.3
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.1e-131 474.9 718 42.6
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.1e-122 444.1 841 39.1
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 8.9e-121 438.7 531 52.9
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 8.6e-116 422.2 886 35.2
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.6e-114 417.9 468 55.3
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.2e-112 411.8 523 48.9
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.4e-112 410.2 455 54.7
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.2e-110 403.7 523 51.1
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 7.8e-109 399.1 298 70.5
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 7.3e-107 392.5 337 63.5
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.0e-104 384.4 421 56.3
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.8e-87 327.0 263 66.9
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 2.7e-85 320.9 807 33.0
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 7.8e-85 319.3 524 41.0
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 7.3e-83 312.8 446 45.5
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 2.0e-80 304.7 752 31.2
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 6.6e-76 289.7 899 29.3
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 1.9e-75 288.1 549 36.4
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 7.3e-75 286.2 658 36.2
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 1.2e-72 278.9 442 42.3
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 5.1e-60 236.9 358 45.5
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.1e-53 214.9 396 39.4
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-52 212.2 377 45.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 2.0e-48 198.4 247 52.6
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.3e-44 184.9 767 26.1
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-40 172.2 333 43.5
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.4e-40 171.0 338 38.5
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.9e-40 170.2 311 45.0
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 2.6e-35 154.8 123 61.8
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 7.0e-33 146.7 136 61.8
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 5.5e-30 137.1 138 55.1
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-28 132.5 311 37.3
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-27 129.0 263 39.9
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-26 124.4 143 55.2
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.5e-24 117.9 198 43.4
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.2e-23 115.2 120 54.2
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.9e-23 114.8 116 56.0
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-23 114.8 254 37.4
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 3.0e-20 104.8 92 58.7
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 1.7e-18 99.0 92 57.6
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-17 94.4 126 46.8
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.0e-17 93.6 202 39.6
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.7e-16 91.7 301 31.6
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.5e-16 91.3 220 36.8
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.0e-15 89.7 82 56.1
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.3e-15 89.4 81 56.8
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 4.2e-14 84.3 221 34.4
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-14 84.3 70 67.1
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.2e-12 77.4 155 40.6
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 2.0e-11 75.5 136 41.9
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-11 75.5 80 55.0
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.6e-11 75.1 73 54.8
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 6.3e-10 70.5 77 61.0
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 1.4e-09 69.3 101 43.6
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 4.1e-09 67.8 51 68.6
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 9.1e-09 66.6 64 53.1
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.9e-08 63.9 57 57.9
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 1.0e-07 63.2 45 68.9
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 2.3e-07 62.0 68 63.2
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-06 59.7 207 32.4
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 2.5e-06 58.5 91 44.0
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 3.3e-06 58.2 74 50.0
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 4.2e-06 57.8 102 39.2
HPP92_028374 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.2e-06 57.8 106 38.7
HPP92_027089 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.2e-06 57.0 106 38.7


User provided reference genes

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