Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 7.5e-95 350.5 179 100.0
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 3.0e-75 285.4 180 83.9
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 2.7e-28 129.4 178 43.8
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 5.2e-27 125.2 188 42.6
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 6.7e-27 124.8 179 40.2
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 1.5e-26 123.6 180 40.0
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 8.2e-25 117.9 130 43.1
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 2.4e-24 116.3 181 40.9
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 3.1e-24 115.9 191 38.2
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 3.1e-24 115.9 188 38.8
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 1.2e-23 114.0 169 43.2
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 2.0e-23 113.2 195 36.9
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 2.6e-23 112.8 181 38.7
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 1.5e-21 107.1 153 44.4
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 2.5e-21 106.3 158 42.4
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 3.2e-21 105.9 134 47.0
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 5.5e-21 105.1 174 37.9
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 1.4e-19 100.5 178 39.9
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 1.4e-19 100.5 204 34.3
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 3.0e-19 99.4 161 39.8
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 2.0e-18 96.7 143 42.7
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 2.6e-18 96.3 125 44.0
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 7.5e-18 94.7 169 40.2
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 9.8e-18 94.4 191 35.6
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 1.3e-17 94.0 183 38.3
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 1.3e-17 94.0 192 36.5
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.3e-17 94.0 194 35.6
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 1.7e-17 93.6 173 38.2
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 1.7e-17 93.6 175 38.9
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 2.8e-17 92.8 198 35.4
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 6.3e-17 91.7 195 35.9
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 8.3e-17 91.3 108 46.3
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 1.1e-16 90.9 86 47.7
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 1.1e-16 90.9 189 37.0
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 1.8e-16 90.1 206 33.5
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 1.8e-16 90.1 192 38.0
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.4e-16 89.7 198 34.8
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 2.4e-16 89.7 192 36.5
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 4.1e-16 89.0 190 34.2
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 7.0e-16 88.2 127 42.5
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.2e-15 87.4 181 35.9
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 4.5e-15 85.5 127 42.5
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 7.7e-15 84.7 197 35.0
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 7.7e-15 84.7 127 42.5
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 1.0e-14 84.3 138 37.0
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.0e-14 84.3 72 51.4
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.7e-14 83.6 187 32.1
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 1.7e-14 83.6 139 40.3
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 5.0e-14 82.0 178 29.8
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 6.5e-14 81.6 173 31.8
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 6.5e-14 81.6 123 42.3
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 6.5e-14 81.6 122 37.7
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 8.5e-14 81.3 128 37.5
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 1.5e-13 80.5 194 30.9
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 2.5e-13 79.7 137 40.1
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 4.2e-13 79.0 184 33.7
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 9.4e-13 77.8 159 34.0
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 9.4e-13 77.8 140 35.7
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 1.2e-12 77.4 185 34.1
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 1.2e-12 77.4 137 38.7
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 1.6e-12 77.0 140 34.3
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 1.6e-12 77.0 128 37.5
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 1.6e-12 77.0 137 35.8
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 2.1e-12 76.6 62 56.5
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 3.6e-12 75.9 159 36.5
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 3.6e-12 75.9 162 34.6
CDE08G1405 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 4.7e-12 75.5 163 32.5
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.7e-12 75.5 140 35.0
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 8.0e-12 74.7 133 34.6
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 1.0e-11 74.3 159 35.2
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 1.4e-11 73.9 125 36.0
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 1.4e-11 73.9 144 32.6
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 1.4e-11 73.9 65 50.8
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 2.3e-11 73.2 127 37.0
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 2.3e-11 73.2 162 34.0
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 2.3e-11 73.2 127 37.0
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 4.0e-11 72.4 65 49.2
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 5.2e-11 72.0 159 34.6
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 5.2e-11 72.0 159 34.6
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 5.2e-11 72.0 186 30.6
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 6.8e-11 71.6 183 31.7
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 1.2e-10 70.9 172 32.0
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 1.2e-10 70.9 65 49.2
CDE02G0326 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 2.6e-10 69.7 176 29.5
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 4.4e-10 68.9 146 34.2
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 4.4e-10 68.9 64 45.3
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 4.4e-10 68.9 64 45.3
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 9.8e-10 67.8 185 29.2
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 1.3e-09 67.4 63 46.0
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 1.3e-09 67.4 124 35.5
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 2.2e-09 66.6 179 30.2
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 2.8e-09 66.2 66 45.5
ATR1001G015 Amborella trichopoda HOM05D007511 ORTHO05D003753 4.9e-09 65.5 200 32.0
AUR62029588 Chenopodium quinoa HOM05D001418 ORTHO05D003753 4.9e-09 65.5 181 29.3
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 4.9e-09 65.5 102 34.3
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 1.1e-08 64.3 59 45.8
Lalb_Chr07g0184281 Lupinus albus HOM05D001418 ORTHO05D003753 1.4e-08 63.9 62 48.4
Atru.chr4.944 Acer truncatum HOM05D001418 ORTHO05D003753 2.4e-08 63.2 59 49.2
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 2.4e-08 63.2 121 31.4
AUR62034848 Chenopodium quinoa HOM05D001418 ORTHO05D003753 4.1e-08 62.4 172 32.0
Ciclev10003211m.g Citrus clementina HOM05D001418 ORTHO05D003753 4.1e-08 62.4 176 30.1
Lalb_Chr12g0203061 Lupinus albus HOM05D001418 ORTHO05D003753 5.4e-08 62.0 62 45.2
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 5.4e-08 62.0 59 44.1
QL04p052194 Quercus lobata HOM05D007511 ORTHO05D003753 5.4e-08 62.0 133 36.1
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 9.1e-08 61.2 66 40.9
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 1.2e-07 60.8 63 46.0
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 1.2e-07 60.8 66 40.9
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 1.6e-07 60.5 150 32.0
Zm00001eb112650 Zea mays HOM05D001418 ORTHO05D003753 2.0e-07 60.1 91 34.1
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 3.5e-07 59.3 120 30.0
CiPaw.03G118500 Carya illinoinensis HOM05D001418 ORTHO05D003753 4.5e-07 58.9 63 42.9
Os12g0182000 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 4.5e-07 58.9 131 33.6
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 5.9e-07 58.5 63 44.4
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 5.9e-07 58.5 63 44.4
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 5.9e-07 58.5 63 44.4
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 5.9e-07 58.5 63 44.4
CSS0038510 Camellia sinensis var. sinensis HOM05D007511 ORTHO05D003753 5.9e-07 58.5 61 44.3
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 5.9e-07 58.5 197 27.4
Glyma.06G155400 Glycine max HOM05D001418 ORTHO05D003753 5.9e-07 58.5 66 42.4
Zm00001eb408450 Zea mays HOM05D001418 ORTHO05D003753 5.9e-07 58.5 198 30.8
AUR62000505 Chenopodium quinoa HOM05D001418 ORTHO05D003753 7.7e-07 58.2 158 32.3
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 1.0e-06 57.8 65 38.5
Sabra05G0054800 Salix brachista HOM05D001418 ORTHO05D003753 1.0e-06 57.8 63 44.4
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 1.3e-06 57.4 62 43.5
Sabra07G0084500 Salix brachista HOM05D001418 ORTHO05D003753 1.3e-06 57.4 185 29.2
Sc06g0005400 Simmondsia chinensis HOM05D001418 ORTHO05D003753 1.3e-06 57.4 65 40.0
Aqoxy6G00297 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 2.3e-06 56.6 170 31.8
Thecc.01G136200 Theobroma cacao HOM05D001418 ORTHO05D003753 2.3e-06 56.6 192 31.8
Potri.005G066500 Populus trichocarpa HOM05D001418 ORTHO05D003753 3.8e-06 55.8 180 30.6
CiPaw.03G118600 Carya illinoinensis HOM05D001418 ORTHO05D003753 5.0e-06 55.5 195 27.7


User provided reference genes

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