Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 1.6e-82 309.3 148 100.0
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 3.8e-36 155.2 150 52.0
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 1.0e-33 147.1 149 51.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.8e-33 146.4 149 55.0
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 3.0e-33 145.6 149 53.7
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 6.8e-33 144.4 148 54.7
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.5e-32 143.3 151 49.7
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 7.5e-32 141.0 153 48.4
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 1.3e-31 140.2 151 53.0
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.7e-31 139.8 153 48.4
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 1.4e-30 136.7 150 52.7
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 7.0e-30 134.4 114 57.0
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.2e-29 133.7 153 48.4
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.6e-29 133.3 150 52.7
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 3.5e-29 132.1 148 47.3
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 6.0e-29 131.3 151 46.4
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 7.8e-29 131.0 154 51.3
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.3e-28 129.4 152 51.3
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 8.6e-28 127.5 150 44.0
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.1e-27 127.1 154 48.7
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 2.5e-27 125.9 154 48.7
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.6e-27 124.8 148 48.0
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 7.3e-27 124.4 159 43.4
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 9.5e-27 124.0 151 47.0
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.6e-26 123.2 147 45.6
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 2.1e-26 122.9 158 47.5
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 2.1e-26 122.9 146 45.9
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 2.1e-26 122.9 149 46.3
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.8e-26 122.5 154 46.8
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 4.7e-26 121.7 146 50.7
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 8.0e-26 120.9 162 39.5
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 3.1e-25 119.0 154 46.8
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 6.8e-25 117.9 158 47.5
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 6.8e-25 117.9 149 43.6
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 9.8e-24 114.0 118 50.8
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 2.9e-23 112.5 164 40.9
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 2.9e-23 112.5 149 42.3
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 8.3e-23 110.9 149 45.0
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 1.9e-22 109.8 152 42.1
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 5.4e-22 108.2 156 44.9
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 7.0e-22 107.8 157 42.7
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 2.7e-21 105.9 156 46.2
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 6.0e-21 104.8 157 43.9
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 6.0e-21 104.8 154 42.9
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 6.0e-21 104.8 157 40.1
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 7.8e-21 104.4 158 38.6
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.7e-20 103.2 154 42.2
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 2.3e-20 102.8 147 42.9
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 1.1e-19 100.5 162 39.5
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 9.5e-19 97.4 162 42.6
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.6e-18 96.7 151 43.7
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 2.8e-18 95.9 149 41.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 3.6e-18 95.5 145 42.8
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 3.6e-18 95.5 157 39.5
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 8.1e-18 94.4 155 41.9
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 1.1e-17 94.0 157 40.8
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 1.4e-17 93.6 164 39.0
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.4e-17 93.6 113 47.8
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.4e-17 93.6 130 41.5
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 1.8e-17 93.2 115 46.1
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 3.1e-17 92.4 107 46.7
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.2e-17 91.7 145 37.2
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 1.5e-16 90.1 104 39.4
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 2.0e-16 89.7 130 42.3
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.6e-16 89.4 157 36.3
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 9.9e-16 87.4 155 38.1
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 9.9e-16 87.4 168 38.7
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.3e-15 87.0 150 39.3
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.2e-15 86.3 154 37.0
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 2.2e-15 86.3 62 62.9
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 3.7e-15 85.5 172 33.1
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 4.9e-15 85.1 62 67.7
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 4.9e-15 85.1 162 37.7
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 1.1e-14 84.0 165 38.2
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.4e-14 83.6 124 45.2
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.4e-14 83.6 163 37.4
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 1.9e-14 83.2 154 37.0
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 2.4e-14 82.8 62 66.1
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 3.2e-14 82.4 158 38.6
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 4.1e-14 82.0 104 48.1
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 4.1e-14 82.0 104 48.1
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 4.1e-14 82.0 104 48.1
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 5.4e-14 81.6 149 36.9
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 5.4e-14 81.6 149 36.9
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 5.4e-14 81.6 82 54.9
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 5.4e-14 81.6 124 44.4
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 7.1e-14 81.3 156 38.5
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.2e-13 80.5 131 38.9
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 3.5e-13 79.0 149 37.6
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 4.6e-13 78.6 100 43.0
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 6.0e-13 78.2 173 35.8
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 7.8e-13 77.8 117 35.9
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 5.1e-12 75.1 161 32.9
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 3.3e-11 72.4 115 35.7
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 1.2e-10 70.5 149 31.5
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 6.2e-10 68.2 119 35.3
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 8.1e-10 67.8 159 34.0
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 3.1e-09 65.9 64 50.0
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 4.0e-09 65.5 150 32.7
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 5.2e-09 65.1 36 69.4
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 6.8e-09 64.7 72 48.6
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.0e-08 63.2 123 33.3
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 4.9e-07 58.5 58 44.8


User provided reference genes

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