Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.7e-114 416.0 214 100.0
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 6.3e-96 354.4 210 85.2
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 4.2e-92 341.7 225 78.7
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.6e-88 329.7 218 78.9
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.6e-88 329.7 223 77.6
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.7e-88 328.6 225 76.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.4e-87 326.6 206 82.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.4e-87 326.6 206 79.6
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.4e-87 326.6 225 75.6
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.8e-87 326.2 221 76.5
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.8e-87 326.2 227 74.9
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.8e-87 326.2 225 73.8
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.1e-87 325.1 225 75.1
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.1e-87 325.1 225 75.1
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 3.4e-86 322.0 219 76.7
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 4.5e-86 321.6 221 75.1
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.0e-85 320.5 217 76.0
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.3e-85 320.1 218 75.2
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 2.9e-85 318.9 225 72.9
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 3.8e-85 318.5 219 75.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 5.0e-85 318.2 219 75.3
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 8.5e-85 317.4 219 76.3
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 8.5e-85 317.4 217 75.1
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.1e-84 317.0 219 74.9
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.4e-84 316.6 219 75.3
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 2.5e-84 315.8 223 73.1
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 3.2e-84 315.5 219 75.3
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 5.5e-84 314.7 210 77.1
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.2e-83 313.5 215 78.1
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.2e-83 313.5 220 74.1
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.2e-83 313.5 221 72.4
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.6e-83 313.2 219 75.8
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.1e-83 312.8 219 74.9
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.7e-83 312.4 214 75.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.7e-83 312.4 217 76.0
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 3.6e-83 312.0 219 74.0
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 4.6e-83 311.6 215 75.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 6.1e-83 311.2 220 72.3
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 6.1e-83 311.2 225 72.9
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 6.1e-83 311.2 225 72.9
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.3e-82 309.3 216 73.6
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.0e-82 308.9 226 69.5
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.0e-82 308.9 226 69.5
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 3.9e-82 308.5 219 74.9
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 8.8e-82 307.4 247 68.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 8.8e-82 307.4 247 68.8
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 8.8e-82 307.4 208 76.0
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.1e-81 307.0 214 73.4
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.1e-81 307.0 210 74.8
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.5e-81 306.6 219 72.6
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 3.3e-81 305.4 219 71.7
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.3e-81 305.1 208 74.0
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 5.7e-81 304.7 212 74.1
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 7.4e-81 304.3 231 71.0
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 7.4e-81 304.3 219 71.2
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 9.7e-81 303.9 219 71.2
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.3e-80 303.5 210 74.8
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 1.3e-80 303.5 221 71.9
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 2.2e-80 302.8 218 72.0
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.8e-80 302.4 228 70.6
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 6.3e-80 301.2 214 74.3
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 8.2e-80 300.8 211 74.9
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.1e-79 300.4 215 74.0
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.8e-79 299.7 209 75.1
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.8e-79 299.7 209 75.1
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 3.1e-79 298.9 212 72.6
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 4.1e-79 298.5 215 72.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 4.1e-79 298.5 247 64.0
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.9e-79 297.7 207 73.4
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 6.9e-79 297.7 215 73.5
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.9e-79 297.7 210 74.3
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 9.1e-79 297.4 232 69.8
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.5e-78 296.6 214 73.4
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.5e-78 296.6 213 70.9
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 7.7e-78 294.3 231 68.4
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.7e-77 293.1 209 73.7
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 3.8e-77 292.0 219 71.2
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 5.0e-77 291.6 204 74.5
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.2e-76 288.9 206 73.8
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 9.4e-76 287.3 212 69.8
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.1e-75 286.2 196 76.5
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.1e-75 286.2 208 71.2
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 2.1e-75 286.2 207 72.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 3.6e-75 285.4 235 66.8
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 4.4e-73 278.5 206 70.9
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 3.7e-72 275.4 207 69.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 6.3e-72 274.6 200 72.0
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 7.0e-71 271.2 193 72.5
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.2e-68 261.9 183 72.1
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.8e-64 249.2 197 69.5
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.1e-63 247.3 207 62.3
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.4e-63 246.9 206 60.7
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.8e-63 246.5 214 63.1
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.1e-63 245.4 207 62.3
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.0e-63 244.6 170 77.6
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.8e-61 238.8 207 61.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.5e-60 236.9 210 63.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.6e-59 233.4 173 73.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 3.6e-59 232.3 223 58.3
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 4.4e-57 225.3 202 65.8
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 5.4e-55 218.4 154 78.6
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 2.7e-54 216.1 173 67.1
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.5e-53 211.5 175 64.0
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.8e-47 193.4 134 70.1
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.3e-45 187.2 150 73.3
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-41 174.1 138 70.3
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 2.3e-34 149.8 138 61.6
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 8.9e-34 147.9 93 76.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.4e-33 145.6 113 71.7
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.7e-32 143.7 120 65.0
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.3e-29 134.0 205 48.8
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.2e-25 120.9 115 64.3
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.5e-25 120.6 204 38.7
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.7e-24 117.1 108 60.2
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 6.4e-24 115.2 212 37.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 7.1e-23 111.7 197 35.0
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 8.6e-21 104.8 57 77.2
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.9e-20 103.6 66 83.3
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.2e-17 94.4 71 54.9
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 3.5e-14 82.8 101 52.5
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 2.3e-13 80.1 101 51.5
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 8.9e-10 68.2 100 48.0
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 4.6e-06 55.8 50 60.0


User provided reference genes

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