Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 0.0e+00 1176.4 572 100.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 6.7e-238 827.4 516 76.2
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 4.8e-236 821.2 500 77.8
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.4e-235 819.7 510 75.7
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.2e-234 816.6 503 76.3
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.3e-233 813.1 518 73.6
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.3e-233 813.1 517 73.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 5.0e-233 811.2 511 76.5
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.1e-232 810.1 515 75.9
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 9.4e-232 807.0 509 74.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 3.6e-231 805.1 498 75.9
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 2.3e-230 802.4 518 74.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.5e-229 799.7 504 76.2
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 6.3e-228 794.3 505 74.5
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 8.2e-228 793.9 508 73.8
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 2.4e-227 792.3 530 71.7
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.1e-227 792.0 514 72.6
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.1e-227 792.0 514 72.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 1.7e-225 786.2 507 71.6
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 8.5e-225 783.9 495 74.3
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.1e-224 783.5 518 72.4
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.5e-224 782.3 511 72.2
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 2.5e-224 782.3 517 72.5
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 5.5e-224 781.2 511 73.6
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.6e-223 779.6 516 72.9
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.7e-223 778.9 493 75.9
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 3.6e-223 778.5 517 72.3
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 8.0e-223 777.3 504 72.4
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.0e-222 776.9 519 71.5
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.3e-222 775.8 509 71.3
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.8e-222 774.2 505 72.7
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 6.8e-222 774.2 505 71.3
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 8.8e-222 773.9 483 74.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 5.7e-221 771.2 503 72.0
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 5.7e-221 771.2 506 70.8
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 5.7e-221 771.2 509 72.1
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 9.8e-221 770.4 491 73.7
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.7e-220 769.6 501 71.3
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 2.8e-220 768.8 507 71.8
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 3.7e-220 768.5 516 72.1
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.1e-219 766.9 518 71.4
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.1e-219 766.9 508 70.7
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.2e-218 763.5 550 66.9
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 5.9e-218 761.1 533 68.9
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.0e-217 760.4 513 71.0
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.3e-217 760.0 504 70.8
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.5e-216 756.5 506 70.8
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 1.9e-216 756.1 480 72.5
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 4.2e-216 755.0 467 76.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.2e-216 755.0 513 70.6
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.1e-215 752.7 516 69.8
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 2.1e-215 752.7 503 69.8
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 3.6e-215 751.9 513 70.4
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.6e-215 751.9 518 69.7
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 3.6e-215 751.9 509 69.0
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.7e-215 751.5 518 69.7
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 4.7e-215 751.5 510 68.6
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 8.0e-215 750.7 523 67.9
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 1.0e-214 750.4 490 71.6
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 4.0e-214 748.4 502 70.1
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 4.0e-214 748.4 516 70.0
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.4e-213 745.3 509 70.3
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.3e-212 743.4 515 68.3
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.7e-212 743.0 492 70.5
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.9e-212 741.5 513 69.8
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.1e-211 740.3 510 69.2
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.4e-211 740.0 514 69.8
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.8e-211 739.6 505 69.3
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.2e-210 736.9 504 69.2
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.6e-210 736.5 498 70.9
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 1.6e-210 736.5 498 71.1
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.6e-210 736.5 498 70.9
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.0e-210 736.1 519 67.4
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 2.7e-210 735.7 504 69.4
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.5e-210 735.3 472 73.7
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.1e-207 726.1 477 72.3
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 6.1e-207 724.5 455 74.9
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 8.0e-207 724.2 499 69.7
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.2e-206 721.5 522 67.2
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.6e-205 719.2 485 69.3
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 7.5e-205 717.6 499 67.9
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 9.8e-205 717.2 479 70.8
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 5.4e-203 711.4 459 73.0
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 1.2e-202 710.3 551 63.5
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.6e-202 709.9 485 68.2
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 1.7e-201 706.4 496 66.7
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.5e-200 702.6 511 65.2
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 3.3e-200 702.2 491 65.8
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.2e-199 700.3 528 63.8
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 3.6e-199 698.7 460 72.4
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.1e-198 697.2 495 65.9
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.4e-195 686.8 524 63.4
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.4e-195 684.9 518 66.0
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.4e-190 670.2 488 66.8
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.0e-177 627.5 480 64.2
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 5.8e-173 611.7 483 60.7
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 5.8e-165 585.1 380 72.1
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.5e-157 560.5 371 71.7
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 1.4e-142 510.8 357 67.5
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 2.5e-139 500.0 338 69.8
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.1e-129 465.7 367 61.0
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 8.2e-119 431.8 497 48.7
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.9e-116 423.3 306 65.0
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.8e-113 414.1 319 62.1
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.4e-89 334.7 238 60.9
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 6.8e-81 305.8 219 60.7
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.1e-75 288.5 178 79.2
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.5e-75 288.1 185 70.8
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 4.6e-61 240.0 138 79.7
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.1e-54 218.8 148 63.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 7.9e-21 106.3 103 56.3
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 8.5e-15 86.3 53 67.9
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 3.9e-12 77.4 88 45.5
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 2.6e-11 74.7 78 47.4
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 6.5e-07 60.1 44 63.6


User provided reference genes

Program Settings