Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.7e-197 691.8 355 100.0
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.5e-166 589.7 349 87.4
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 2.1e-125 453.0 355 67.6
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 2.8e-125 452.6 356 67.1
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 6.2e-125 451.4 356 66.6
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 3.4e-123 445.7 355 67.3
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 1.7e-122 443.4 349 68.2
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.1e-118 430.6 357 64.4
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 9.6e-118 427.6 357 64.4
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.6e-117 426.8 355 64.2
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 2.4e-116 422.9 357 65.3
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 3.1e-116 422.5 366 63.4
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 9.0e-116 421.0 361 64.3
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 2.0e-115 419.9 358 64.5
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.0e-115 419.9 357 63.3
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 3.8e-114 415.6 358 63.7
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 8.4e-114 414.5 349 65.3
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.9e-111 405.6 345 63.2
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 5.1e-111 405.2 357 63.0
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.4e-108 397.1 362 61.6
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 4.1e-108 395.6 362 61.9
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 6.9e-108 394.8 350 62.0
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 7.7e-107 391.3 337 64.1
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 2.9e-106 389.4 357 61.3
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.4e-105 387.1 300 68.3
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 8.8e-103 377.9 359 59.6
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 1.1e-102 377.5 330 63.6
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 3.3e-102 375.9 343 60.3
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 5.7e-102 375.2 366 60.4
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.8e-101 372.9 362 59.1
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 4.5e-99 365.5 302 64.9
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 4.2e-97 359.0 349 58.7
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.7e-96 356.3 349 56.4
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 1.8e-95 353.6 360 56.9
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 3.0e-95 352.8 351 57.5
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 3.9e-95 352.4 351 57.0
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 1.5e-94 350.5 352 55.7
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.5e-94 350.5 347 57.1
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.3e-94 349.4 350 57.4
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 1.3e-93 347.4 398 52.5
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 2.2e-93 346.7 351 55.8
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.8e-92 343.6 353 56.9
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 2.4e-92 343.2 351 55.6
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 2.4e-92 343.2 351 56.4
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 3.1e-92 342.8 351 55.8
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 9.1e-92 341.3 351 55.3
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 2.6e-91 339.7 358 55.9
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 3.5e-91 339.3 356 54.5
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 4.5e-91 339.0 356 54.8
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.9e-90 336.3 358 56.1
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.9e-89 333.6 301 59.8
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 4.2e-89 332.4 364 55.5
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 4.2e-89 332.4 329 58.4
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 1.2e-88 330.9 335 55.8
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 1.6e-88 330.5 351 54.1
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 2.1e-88 330.1 350 54.9
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 6.1e-88 328.6 361 54.0
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 3.9e-87 325.9 356 52.8
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 8.8e-87 324.7 430 48.1
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 9.7e-86 321.2 330 57.9
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.2e-85 320.1 334 54.5
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 4.1e-84 315.8 302 58.6
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 9.1e-84 314.7 304 59.5
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 7.7e-83 311.6 388 49.5
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 1.1e-81 307.8 355 51.5
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 8.0e-80 301.6 351 53.0
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.3e-79 300.1 306 54.9
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 6.8e-79 298.5 367 51.2
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 7.5e-78 295.0 330 54.2
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.4e-76 290.8 394 48.0
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 1.8e-76 290.4 385 47.3
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 9.1e-76 288.1 286 55.2
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 1.6e-75 287.3 235 65.1
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 3.5e-75 286.2 345 53.0
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.9e-74 283.1 345 49.0
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 1.4e-71 274.2 354 46.3
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 2.3e-71 273.5 365 46.0
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 4.8e-69 265.8 307 54.7
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 6.3e-69 265.4 340 50.0
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 1.8e-68 263.8 338 48.8
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.4e-68 263.5 339 49.0
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 3.1e-68 263.1 323 50.5
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.2e-67 261.2 313 50.2
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.3e-66 257.7 252 54.4
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 8.6e-66 255.0 334 49.4
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 2.5e-65 253.4 330 51.8
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 3.3e-65 253.1 329 47.7
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.6e-64 250.8 239 58.6
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 4.7e-64 249.2 339 47.8
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 2.0e-62 243.8 294 50.3
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 2.6e-62 243.4 337 49.3
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 9.8e-62 241.5 281 53.4
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 3.7e-61 239.6 363 44.1
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 2.3e-58 230.3 211 61.1
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 9.8e-54 214.9 301 47.2
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.9e-49 200.7 336 40.8
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 7.3e-49 198.7 341 43.4
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.4e-47 194.5 219 53.9
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 2.3e-47 193.7 345 42.6
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 2.9e-45 186.8 326 40.5
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 5.4e-44 182.6 274 43.4
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 4.6e-43 179.5 274 44.5
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 7.8e-43 178.7 342 38.6
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.0e-42 178.3 352 39.8
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 5.1e-42 176.0 352 40.1
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 6.6e-42 175.6 351 37.3
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 8.6e-42 175.3 352 38.1
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 1.6e-40 171.0 348 39.4
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 2.1e-40 170.6 331 39.6
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 2.1e-40 170.6 333 39.0
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 2.8e-40 170.2 352 38.4
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 2.8e-40 170.2 352 38.4
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 4.7e-40 169.5 347 37.5
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 4.7e-40 169.5 352 38.6
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 3.1e-39 166.8 331 39.3
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.5e-38 164.5 342 38.9
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 2.0e-38 164.1 342 38.9
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 2.2e-37 160.6 192 49.5
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.4e-36 157.9 304 39.1
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 6.0e-35 152.5 290 38.3
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 5.1e-34 149.4 348 36.8
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 1.7e-29 134.4 315 34.9
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 1.8e-23 114.4 169 45.0
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.2e-21 107.5 291 34.0
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 2.7e-19 100.5 201 39.3
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 7.9e-19 99.0 138 44.2
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.3e-18 98.2 250 36.4
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 5.6e-17 92.8 348 29.9
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 9.6e-17 92.0 134 48.5
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 4.8e-16 89.7 66 66.7
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 6.2e-16 89.4 171 37.4
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 1.4e-15 88.2 187 36.4
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 5.3e-15 86.3 171 37.4
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 9.0e-15 85.5 43 90.7
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 5.8e-14 82.8 131 42.0
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 2.9e-13 80.5 77 49.4
Dinv07115 Davidia involucrata HOM05D005141 ORTHO05D030953 2.0e-06 57.8 61 62.3
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 5.8e-06 56.2 133 31.6
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 5.8e-06 56.2 133 31.6


User provided reference genes

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