Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0106 Tripterygium wilfordii HOM05D006932 ORTHO05D413486 1.2e-88 329.7 159 100.0
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 2.4e-15 86.3 59 78.0
QL02p012013 Quercus lobata HOM05D006932 ORTHO05D009616 1.2e-11 73.9 59 64.4
CiPaw.07G147900 Carya illinoinensis HOM05D006932 ORTHO05D009616 2.1e-11 73.2 59 64.4
Ciclev10003784m.g Citrus clementina HOM05D006932 ORTHO05D009616 4.6e-11 72.0 59 64.4
GSVIVG01009938001 Vitis vinifera HOM05D006932 ORTHO05D009616 7.9e-11 71.2 108 42.6
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 1.0e-10 70.9 59 64.4
Psat0s2878g0080 Pisum sativum HOM05D006932 ORTHO05D009616 1.3e-10 70.5 59 57.6
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 1.3e-10 70.5 59 62.7
TAR376G0059 Trochodendron aralioides HOM05D006932 ORTHO05D009616 1.3e-10 70.5 59 59.3
Ca_00838_v3 Cicer arietinum L. HOM05D006932 ORTHO05D009616 3.0e-10 69.3 59 55.9
TPR.G34552 Trifolium pratense HOM05D006932 ORTHO05D009616 3.0e-10 69.3 59 57.6
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 8.7e-10 67.8 59 61.0
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 1.5e-09 67.0 109 42.2
Lj1g0021590 Lotus japonicus HOM05D006932 ORTHO05D009616 2.5e-09 66.2 59 54.2
Medtr3g113630 Medicago truncatula HOM05D006932 ORTHO05D009616 2.5e-09 66.2 59 54.2
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 3.3e-09 65.9 59 55.9
ECA238G0815 Erigeron canadensis HOM05D006932 ORTHO05D009616 4.3e-09 65.5 59 57.6
Cpa.g.sc26.310 Carica papaya HOM05D006932 ORTHO05D009616 5.6e-09 65.1 59 61.0
arahy.Tifrunner.gnm1.ann1.XXR9N9 Arachis hypogaea HOM05D006932 ORTHO05D009616 7.3e-09 64.7 59 55.9
arahy.Tifrunner.gnm1.ann1.Z8J4EM Arachis hypogaea HOM05D006932 ORTHO05D009616 7.3e-09 64.7 59 55.9
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 9.6e-09 64.3 59 54.2
ClCG08G014220 Citrullus lanatus HOM05D006932 ORTHO05D009616 1.3e-08 63.9 59 54.2
Glyma.06G023500 Glycine max HOM05D006932 ORTHO05D009616 1.3e-08 63.9 59 57.6
MELO3C011020.2 Cucumis melo HOM05D006932 ORTHO05D009616 1.6e-08 63.5 59 54.2
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 1.6e-08 63.5 59 54.2
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 1.6e-08 63.5 59 54.2
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 2.1e-08 63.2 59 55.9
Lalb_Chr23g0266091 Lupinus albus HOM05D006932 ORTHO05D009616 2.1e-08 63.2 59 52.5
Lj6g0018015 Lotus japonicus HOM05D006932 ORTHO05D009616 2.8e-08 62.8 59 50.8
Manes.18G012000 Manihot esculenta HOM05D006932 ORTHO05D009616 2.8e-08 62.8 59 55.9
Prupe.8G272100 Prunus persica HOM05D006932 ORTHO05D009616 2.8e-08 62.8 57 54.4
Sc15g0004860 Simmondsia chinensis HOM05D006932 ORTHO05D009616 3.6e-08 62.4 59 50.8
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 6.2e-08 61.6 59 54.2
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 8.1e-08 61.2 59 54.2
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 8.1e-08 61.2 59 54.2
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 8.1e-08 61.2 59 54.2
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 1.4e-07 60.5 59 52.5
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.8e-07 60.1 57 54.4
VMungo1309G1702 Vigna mungo HOM05D006932 ORTHO05D009616 2.4e-07 59.7 59 52.5
HanXRQChr14g0431051 Helianthus annuus HOM05D006932 ORTHO05D009616 3.1e-07 59.3 59 54.2
Lsat_1_v5_gn_2_12640 Lactuca sativa HOM05D006932 ORTHO05D009616 3.1e-07 59.3 54 57.4
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 3.1e-07 59.3 57 54.4
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 3.1e-07 59.3 59 47.5
AUR62041481 Chenopodium quinoa HOM05D006932 ORTHO05D009616 4.0e-07 58.9 53 52.8
COL.COLO4_26127 Corchorus olitorius HOM05D006932 ORTHO05D009616 4.0e-07 58.9 59 50.8
Phvul.009G009500 Phaseolus vulgaris HOM05D006932 ORTHO05D009616 4.0e-07 58.9 59 52.5
SGA_v2.0_scaffold92G28210 Striga asiatica HOM05D006932 ORTHO05D009616 4.0e-07 58.9 59 52.5
Peaxi162Scf00553g00220 Petunia axillaris HOM05D006932 ORTHO05D009616 6.9e-07 58.2 59 52.5
AUR62040551 Chenopodium quinoa HOM05D006932 ORTHO05D009616 9.0e-07 57.8 53 50.9
Solyc08g042030.3 Solanum lycopersicum HOM05D006932 ORTHO05D009616 9.0e-07 57.8 59 50.8
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 9.0e-07 57.8 59 50.8
EL10Ac1g02169 Beta vulgaris HOM05D006932 ORTHO05D009616 1.2e-06 57.4 87 36.8
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 1.5e-06 57.0 59 50.8
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 1.5e-06 57.0 91 39.6
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 2.0e-06 56.6 59 50.8
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 2.0e-06 56.6 79 39.2
Migut.C00855 Erythranthe guttata HOM05D006932 ORTHO05D009616 4.5e-06 55.5 60 51.7
Gohir.A05G185600 Gossypium hirsutum HOM05D006932 ORTHO05D009616 4.5e-06 55.5 59 54.2
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 4.5e-06 55.5 59 50.8
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 7.6e-06 54.7 60 53.3
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 7.6e-06 54.7 59 50.8


User provided reference genes

Program Settings