Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 3.2e-65 251.5 120 100.0
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.1e-60 236.5 120 92.5
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 6.9e-60 233.8 120 90.0
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 9.0e-60 233.4 120 89.2
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.0e-60 233.4 120 90.8
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.0e-60 233.4 120 90.8
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.0e-60 233.4 120 90.8
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 9.0e-60 233.4 120 90.0
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 2.6e-59 231.9 120 90.8
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.6e-59 231.9 120 90.0
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.4e-59 231.5 120 90.0
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 3.4e-59 231.5 144 80.6
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 4.5e-59 231.1 120 89.2
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 4.5e-59 231.1 120 89.2
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.5e-59 231.1 120 90.0
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 1.3e-58 229.6 119 88.2
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 2.9e-58 228.4 120 87.5
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 3.8e-58 228.0 120 85.8
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.8e-58 228.0 119 89.1
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 6.5e-58 227.3 120 86.7
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 6.5e-58 227.3 120 87.5
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 8.4e-58 226.9 120 88.3
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.1e-57 226.5 120 88.3
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 2.5e-57 225.3 120 85.0
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 2.5e-57 225.3 120 85.8
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 5.5e-57 224.2 120 85.0
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 5.5e-57 224.2 120 86.7
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 9.3e-57 223.4 120 84.2
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.2e-56 223.0 120 84.2
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 1.2e-56 223.0 120 84.2
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 2.1e-56 222.2 120 84.2
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 2.1e-56 222.2 120 84.2
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 3.5e-56 221.5 120 85.0
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 3.5e-56 221.5 120 85.0
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 3.5e-56 221.5 120 83.3
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 4.6e-56 221.1 119 84.9
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 4.6e-56 221.1 120 84.2
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 6.0e-56 220.7 120 85.0
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 6.0e-56 220.7 120 83.3
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 6.0e-56 220.7 120 85.0
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 6.0e-56 220.7 120 82.5
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 83.2
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.0e-55 219.9 120 83.3
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 85.7
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 3.0e-55 218.4 120 84.2
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 3.9e-55 218.0 120 84.2
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 3.9e-55 218.0 120 83.3
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 3.9e-55 218.0 120 84.2
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 5.1e-55 217.6 120 83.3
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 6.7e-55 217.2 120 84.2
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.1e-54 216.5 120 83.3
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.1e-54 216.5 120 81.7
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 1.5e-54 216.1 120 83.3
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.5e-54 216.1 120 81.7
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 80.8
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 84.2
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 4.3e-54 214.5 120 80.0
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 5.7e-54 214.2 119 84.0
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 84.2
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 7.4e-54 213.8 119 80.7
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 82.5
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 82.5
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 82.5
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 82.5
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 82.5
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 80.8
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 82.5
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 2.2e-53 212.2 120 82.5
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 2.2e-53 212.2 120 82.5
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 82.5
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 82.5
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 84.2
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 82.5
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 2.8e-53 211.8 120 82.5
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 2.8e-53 211.8 120 81.7
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 3.7e-53 211.5 110 86.4
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 3.7e-53 211.5 120 83.3
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 6.3e-53 210.7 119 82.4
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 6.3e-53 210.7 119 82.4
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 6.3e-53 210.7 111 87.4
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 81.7
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 84.2
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 8.2e-53 210.3 111 86.5
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 81.7
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 83.3
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 79.2
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.0
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 81.7
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 81.7
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 81.7
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 80.0
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 81.7
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 80.8
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 81.7
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 4.1e-52 208.0 119 80.7
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 6.9e-52 207.2 110 88.2
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 81.7
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 1.5e-51 206.1 120 80.0
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 1.5e-51 206.1 120 79.2
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 2.0e-51 205.7 120 82.5
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 79.0
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 2.6e-51 205.3 118 80.5
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 80.0
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 79.2
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 3.4e-51 204.9 115 84.3
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 4.5e-51 204.5 120 80.0
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 4.5e-51 204.5 120 77.5
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 5.9e-51 204.1 120 80.0
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 5.9e-51 204.1 120 79.2
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 7.7e-51 203.8 120 82.5
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 7.7e-51 203.8 118 80.5
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 1.7e-50 202.6 120 79.2
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.9e-50 201.8 110 82.7
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 2.9e-50 201.8 120 78.3
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.1e-49 199.9 120 78.3
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.1e-49 199.9 120 78.3
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 1.9e-49 199.1 120 77.5
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.6e-48 196.1 120 77.5
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 5.7e-46 187.6 111 77.5
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.3e-45 186.4 107 84.1
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 2.8e-45 185.3 110 79.1
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 4.8e-45 184.5 112 78.6
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.9e-44 180.6 95 88.4
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 9.1e-44 180.3 213 47.4
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 9.1e-44 180.3 95 88.4
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 2.0e-43 179.1 110 78.2
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 2.6e-43 178.7 131 66.4
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 2.2e-42 175.6 120 65.8
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 8.5e-42 173.7 91 89.0
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.4e-41 172.9 93 87.1
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 3.2e-41 171.8 124 68.5
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 4.2e-41 171.4 91 84.6
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.5e-41 171.0 91 87.9
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 5.5e-41 171.0 120 67.5
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.2e-40 169.9 93 82.8
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.7e-40 168.7 91 87.9
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.1e-40 167.5 91 85.7
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.9e-39 164.9 86 88.4
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 5.1e-39 164.5 169 52.7
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 1.1e-38 163.3 110 73.6
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 1.1e-38 163.3 110 73.6
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 9.7e-38 160.2 136 64.0
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 9.7e-38 160.2 110 72.7
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 8.2e-37 157.1 94 80.9
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.4e-36 156.4 133 55.6
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 7.0e-36 154.1 120 60.8
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 3.5e-35 151.8 91 75.8
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 5.9e-35 151.0 91 78.0
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 2.9e-34 148.7 91 76.9
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.0e-34 147.9 77 89.6
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 1.1e-33 146.7 120 62.5
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.4e-33 146.4 89 78.7
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 2.5e-33 145.6 94 70.2
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 5.5e-33 144.4 88 76.1
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 3.3e-30 135.2 86 72.1
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 3.1e-28 128.6 109 63.3
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.6e-27 126.3 62 90.3
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 1.3e-26 123.2 62 88.7
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 2.2e-26 122.5 62 85.5
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.5e-26 120.9 120 55.8
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 1.9e-25 119.4 91 67.0
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 1.9e-25 119.4 118 44.9
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 3.2e-25 118.6 62 83.9
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 2.8e-21 105.5 108 43.5
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-19 99.8 53 88.7
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 2.7e-19 99.0 82 64.6
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 7.7e-19 97.4 57 75.4
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.7e-19 97.4 53 86.8
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.5e-17 92.4 57 77.2
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 4.2e-17 91.7 115 40.0
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 1.2e-11 73.6 44 75.0
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 1.5e-06 56.6 35 74.3


User provided reference genes

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