Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.8e-182 640.6 331 100.0
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.1e-175 617.5 331 96.4
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 8.0e-167 590.5 329 91.2
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.4e-166 589.7 325 92.3
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.0e-166 588.6 329 90.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 6.8e-166 587.4 326 91.7
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 6.8e-166 587.4 328 90.9
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 6.8e-166 587.4 329 90.9
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.8e-166 587.4 327 92.0
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.2e-165 586.6 328 90.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.4e-165 585.1 329 90.6
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 5.7e-165 584.3 329 90.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 5.7e-165 584.3 329 90.9
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.3e-164 583.2 328 90.2
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.7e-164 582.8 327 91.1
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.2e-164 582.4 326 91.7
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.9e-164 581.3 326 90.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.4e-163 579.7 329 90.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.4e-163 579.7 328 89.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 5.4e-163 577.8 326 90.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.0e-162 575.9 329 89.7
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.7e-162 575.5 326 89.6
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.5e-162 575.1 329 89.7
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.5e-162 575.1 325 91.1
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.5e-162 575.1 325 91.1
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 5.9e-162 574.3 330 90.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 7.8e-162 573.9 329 89.4
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.3e-161 573.2 329 89.4
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.9e-160 569.3 330 88.5
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.6e-159 565.1 329 88.8
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.6e-159 565.1 326 88.3
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.7e-159 564.7 329 86.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.4e-158 563.1 329 85.7
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 87.1
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.8e-158 562.8 330 87.6
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.3e-158 562.4 326 87.7
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.3e-158 562.4 329 88.4
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.1e-158 562.0 336 86.9
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.4
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.4
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.4
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.4
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 5.2e-158 561.2 329 85.4
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 6.8e-158 560.8 329 85.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 6.8e-158 560.8 328 86.3
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 6.8e-158 560.8 329 88.1
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 8.9e-158 560.5 329 85.4
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.6e-157 558.9 328 85.7
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.4e-157 558.5 330 86.7
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 326 86.5
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 326 86.5
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 5.8e-157 557.8 328 85.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 5.8e-157 557.8 328 87.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.5e-157 557.4 329 84.8
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 9.8e-157 557.0 329 84.8
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.8e-157 557.0 326 86.2
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 9.8e-157 557.0 328 87.5
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.7e-156 556.2 329 85.1
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 84.5
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.7e-156 556.2 356 80.6
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 2.2e-156 555.8 330 84.8
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.2e-156 555.8 328 85.1
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.2e-156 555.8 330 84.8
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.9e-156 555.4 329 86.0
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 2.9e-156 555.4 329 87.5
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 2.9e-156 555.4 329 87.5
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.7e-156 555.1 331 87.0
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.9e-156 554.7 329 86.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 4.9e-156 554.7 330 85.8
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 6.4e-156 554.3 329 84.2
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 6.4e-156 554.3 363 81.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.4e-156 554.3 330 84.5
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 8.3e-156 553.9 328 85.1
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 8.3e-156 553.9 328 85.1
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.4e-155 552.4 330 87.0
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 5.4e-155 551.2 329 84.8
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 325 85.8
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 325 87.4
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 5.4e-155 551.2 382 77.2
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 85.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.5e-154 548.5 329 84.2
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 4.6e-154 548.1 328 86.0
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 6.0e-154 547.7 314 87.3
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.7e-153 546.2 327 84.4
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.9e-153 545.0 329 84.2
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 6.6e-153 544.3 326 84.0
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.5e-152 543.1 329 84.5
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.5e-152 542.3 329 83.0
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.3e-152 540.8 326 83.7
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 6.2e-151 537.7 453 66.0
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.3e-150 535.8 329 83.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.5e-149 533.1 329 83.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.6e-149 532.3 331 81.9
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 7.5e-149 530.8 331 81.6
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-148 530.0 330 82.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.9e-145 518.5 303 87.1
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 1.5e-144 516.5 330 83.6
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 5.6e-144 514.6 329 82.1
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 4.7e-143 511.5 300 86.3
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-142 510.4 330 80.6
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.6e-141 505.8 327 80.4
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 7.6e-141 504.2 328 78.7
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.5e-136 490.0 335 74.9
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.6e-135 486.5 329 74.2
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.8e-135 485.7 330 79.1
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.4e-134 482.6 375 70.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.0e-133 479.6 299 82.9
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.9e-132 475.7 329 72.6
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.4e-132 474.6 326 77.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.5e-128 463.4 329 75.1
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 1.1e-126 457.2 331 75.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 5.8e-125 451.4 279 82.1
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 3.4e-117 425.6 322 70.5
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 7.4e-112 407.9 234 89.7
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 4.0e-110 402.1 323 61.0
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 3.4e-109 399.1 318 62.9
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.2e-107 392.5 321 63.2
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.8e-105 386.7 233 84.5
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.3e-104 382.1 274 73.0
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.3e-103 380.6 315 65.1
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.3e-96 355.9 329 63.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 6.9e-94 348.2 335 60.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.3e-92 344.0 197 90.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.0e-88 330.1 239 68.6
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.7e-87 327.0 223 75.3
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.6e-85 319.7 220 79.1
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 5.0e-84 315.5 220 77.7
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.7e-80 302.0 167 91.0
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-79 300.4 220 75.9
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.7e-76 290.4 339 44.5
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.0e-72 276.9 162 86.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 3.7e-71 272.7 329 52.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.6e-69 267.3 176 77.3
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.5e-68 261.9 267 58.4
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 4.8e-63 245.7 133 91.7
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.3e-57 226.9 129 89.1
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.3e-44 184.5 162 62.3
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.3e-43 179.9 100 86.0
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 3.6e-42 176.4 150 61.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.4e-38 164.5 90 91.1
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 4.6e-37 159.5 181 53.6
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 6.6e-36 155.6 103 78.6
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.9e-35 154.1 87 87.4
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.7e-34 149.4 77 98.7
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 4.9e-31 139.4 69 94.2
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 8.3e-31 138.7 89 82.0
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.1e-30 138.3 88 77.3
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 2.7e-29 133.7 74 90.5
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 5.1e-28 129.4 80 80.0
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 9.5e-27 125.2 91 72.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.9e-24 115.2 75 74.7
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.7e-23 114.4 65 87.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 2.4e-22 110.5 69 81.2
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 9.2e-22 108.6 151 44.4
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 5.6e-19 99.4 63 81.0
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.3e-10 71.6 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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