Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 2.6e-33 144.8 74 100.0
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 3.2e-15 84.7 62 69.4
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 5.4e-15 84.0 68 67.6
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 1.6e-14 82.4 66 66.7
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 2.1e-14 82.0 66 65.2
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 3.5e-14 81.3 66 65.2
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 4.6e-14 80.9 68 63.2
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 1.0e-13 79.7 69 63.8
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 1.0e-13 79.7 66 68.2
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 2.3e-13 78.6 68 61.8
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 3.0e-13 78.2 68 63.2
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.5e-12 75.9 54 70.4
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 1.9e-12 75.5 72 62.5
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 2.5e-12 75.1 67 61.2
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 2.5e-12 75.1 65 60.0
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 3.3e-12 74.7 64 65.6
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 9.6e-12 73.2 64 64.1
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 9.6e-12 73.2 64 64.1
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 9.6e-12 73.2 64 64.1
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 1.6e-11 72.4 52 69.2
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 2.8e-11 71.6 59 61.0
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 2.8e-11 71.6 68 60.3
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 2.8e-11 71.6 68 58.8
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 8.1e-11 70.1 46 73.9
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 8.1e-11 70.1 74 52.7
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 1.1e-10 69.7 59 64.4
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 1.1e-10 69.7 65 63.1
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.1e-10 69.7 74 55.4
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 1.4e-10 69.3 43 79.1
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 1.4e-10 69.3 49 71.4
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 1.8e-10 68.9 59 59.3
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 1.8e-10 68.9 60 63.3
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 2.4e-10 68.6 56 58.9
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 3.1e-10 68.2 67 53.7
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 3.1e-10 68.2 69 59.4
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 4.0e-10 67.8 59 59.3
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 4.0e-10 67.8 74 55.4
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 5.3e-10 67.4 68 57.4
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 5.3e-10 67.4 47 72.3
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 6.9e-10 67.0 61 63.9
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 6.9e-10 67.0 50 68.0
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 9.0e-10 66.6 45 75.6
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 9.0e-10 66.6 45 73.3
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 9.0e-10 66.6 45 75.6
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 9.0e-10 66.6 37 89.2
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 9.0e-10 66.6 37 89.2
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 9.0e-10 66.6 54 64.8
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 1.2e-09 66.2 44 72.7
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 1.2e-09 66.2 45 73.3
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 1.2e-09 66.2 62 56.5
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 1.2e-09 66.2 47 74.5
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 1.2e-09 66.2 65 58.5
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 1.2e-09 66.2 58 63.8
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 1.5e-09 65.9 66 54.5
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 1.5e-09 65.9 54 63.0
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 1.5e-09 65.9 48 72.9
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 2.0e-09 65.5 45 73.3
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 2.0e-09 65.5 62 59.7
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 2.0e-09 65.5 61 59.0
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 2.0e-09 65.5 56 60.7
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 2.6e-09 65.1 37 83.8
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 3.4e-09 64.7 44 72.7
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 4.5e-09 64.3 53 67.9
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 1.0e-08 63.2 39 82.1
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 1.7e-08 62.4 63 55.6
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.7e-08 62.4 63 55.6
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 1.7e-08 62.4 61 59.0
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 1.7e-08 62.4 39 74.4
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 2.2e-08 62.0 63 57.1
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 2.2e-08 62.0 60 60.0
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 3.8e-08 61.2 65 53.8
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 3.8e-08 61.2 54 59.3
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 3.8e-08 61.2 54 59.3
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 3.8e-08 61.2 62 58.1
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 3.8e-08 61.2 36 83.3
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 4.9e-08 60.8 42 71.4
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 4.9e-08 60.8 40 75.0
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 4.9e-08 60.8 36 83.3
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 4.9e-08 60.8 37 75.7
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 4.9e-08 60.8 57 63.2
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 4.9e-08 60.8 65 53.8
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.1e-07 59.7 62 61.3
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.1e-07 59.7 62 61.3
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.1e-07 59.7 62 61.3
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 1.1e-07 59.7 58 60.3
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 1.1e-07 59.7 62 58.1
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 1.4e-07 59.3 51 62.7
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 1.4e-07 59.3 56 60.7
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.4e-07 59.3 62 61.3
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 1.9e-07 58.9 39 74.4
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 9.3e-07 56.6 51 60.8
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 1.2e-06 56.2 48 54.2
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 2.7e-06 55.1 39 69.2
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 2.7e-06 55.1 41 68.3


User provided reference genes

Program Settings