Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.2e-236 822.8 412 100.0
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 8.6e-219 763.5 410 93.2
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 8.2e-137 491.1 411 60.3
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 5.3e-136 488.4 416 60.3
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 1.2e-135 487.3 416 58.9
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 4.5e-135 485.3 416 58.2
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 1.9e-133 479.9 413 59.8
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 1.4e-131 473.8 416 57.2
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 4.4e-130 468.8 412 59.5
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 1.7e-129 466.8 416 57.2
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.1e-128 464.2 414 58.5
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 2.4e-128 463.0 416 58.2
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 5.4e-128 461.8 414 58.2
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 4.7e-124 448.7 416 56.5
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 1.4e-123 447.2 412 55.1
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.0e-123 445.7 413 55.0
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-122 444.1 413 55.4
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 2.0e-122 443.4 412 55.6
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 2.6e-122 443.0 419 54.2
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 3.4e-122 442.6 416 56.5
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 5.7e-122 441.8 412 54.1
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.3e-121 440.7 416 56.2
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-121 440.7 412 54.4
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 4.1e-120 435.6 417 54.4
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 9.1e-120 434.5 410 53.7
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 3.5e-119 432.6 413 54.5
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 5.0e-118 428.7 420 54.0
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.2e-116 424.1 412 54.4
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 3.0e-115 419.5 417 53.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.2e-114 417.5 419 50.6
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 6.4e-113 411.8 410 52.9
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.1e-112 411.0 418 52.6
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 4.1e-112 409.1 339 61.1
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 8.6e-110 401.4 419 51.1
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 2.1e-108 396.7 418 51.4
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 6.2e-108 395.2 331 58.9
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 2.3e-107 393.3 411 49.1
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 8.9e-107 391.3 416 50.0
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 8.9e-107 391.3 417 49.6
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 5.8e-106 388.7 412 48.8
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 1.3e-105 387.5 413 50.8
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.7e-105 387.1 359 57.7
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.6e-103 380.6 411 48.7
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 1.6e-103 380.6 412 49.0
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 2.7e-103 379.8 414 50.0
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 1.3e-102 377.5 414 49.8
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 3.0e-102 376.3 413 48.2
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 3.9e-102 375.9 424 47.4
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 6.6e-102 375.2 421 49.6
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 8.6e-102 374.8 414 47.8
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.4e-99 367.5 416 48.1
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 3.1e-99 366.3 417 47.7
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 4.0e-99 365.9 413 48.2
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 4.4e-98 362.5 417 48.7
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 7.5e-98 361.7 418 46.9
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 2.9e-97 359.8 415 46.7
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 4.9e-97 359.0 414 46.9
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.4e-96 357.5 415 46.5
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.4e-96 357.5 413 48.4
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 2.4e-96 356.7 415 46.5
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 2.4e-96 356.7 414 46.9
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 1.6e-95 354.0 415 45.8
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 4.6e-95 352.4 340 55.3
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 1.0e-94 351.3 438 46.3
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 2.3e-94 350.1 414 46.6
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 6.2e-92 342.0 418 44.3
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 7.6e-90 335.1 416 43.3
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 2.7e-87 326.6 418 47.4
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 6.6e-86 322.0 423 44.4
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 5.4e-80 302.4 436 41.3
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 2.1e-76 290.4 410 41.2
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 3.8e-65 253.1 417 37.6
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.4e-64 251.1 194 60.3
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.8e-62 244.2 207 56.0
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 1.7e-49 201.1 417 33.6
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 1.4e-48 198.0 465 31.6
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 1.6e-47 194.5 417 35.0
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 1.5e-45 188.0 471 30.8
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.8e-44 183.7 164 58.5
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 2.4e-35 154.1 115 66.1
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 4.0e-22 110.2 361 26.3
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 8.8e-22 109.0 368 26.1
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 4.0e-14 83.6 244 29.5
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.1e-08 65.5 178 28.7


User provided reference genes

Program Settings