Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.0e-179 632.5 363 100.0
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.5e-129 466.8 373 73.5
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 4.2e-68 262.7 397 48.9
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 7.2e-68 261.9 389 50.4
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 1.4e-66 257.7 388 48.2
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.3e-66 256.9 302 52.6
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 3.9e-66 256.1 295 53.9
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 2.2e-64 250.4 377 51.7
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 2.4e-63 246.9 371 50.9
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 5.3e-63 245.7 264 54.2
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 5.3e-63 245.7 302 53.6
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 6.9e-63 245.4 403 44.7
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 3.4e-62 243.0 430 44.0
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 7.7e-62 241.9 389 48.3
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 1.3e-61 241.1 302 51.7
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.7e-61 240.7 425 43.5
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 2.2e-61 240.4 392 46.9
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 2.9e-61 240.0 387 49.6
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 6.5e-61 238.8 308 50.0
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 7.2e-60 235.3 287 53.7
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 2.7e-59 233.4 423 44.9
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 4.7e-59 232.6 397 47.4
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 4.7e-59 232.6 366 47.5
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 6.1e-59 232.3 299 52.8
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 1.4e-58 231.1 410 47.1
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.4e-58 231.1 422 46.7
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.4e-58 231.1 392 46.7
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 2.3e-58 230.3 322 52.2
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 6.7e-58 228.8 422 43.8
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 6.7e-58 228.8 422 43.8
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 1.1e-57 228.0 392 45.2
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 4.4e-57 226.1 380 47.6
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 9.7e-57 224.9 441 39.9
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 1.3e-56 224.6 293 49.8
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.7e-56 224.2 322 48.8
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 6.3e-56 222.2 331 47.1
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 8.2e-56 221.9 303 47.9
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 1.1e-55 221.5 413 44.3
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 2.4e-55 220.3 306 51.0
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 2.4e-55 220.3 462 38.5
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 4.1e-55 219.5 297 50.2
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 5.3e-55 219.2 410 41.7
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 7.0e-55 218.8 302 50.3
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 9.1e-55 218.4 439 41.9
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.2e-54 218.0 359 48.7
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 1.0e-53 214.9 385 48.8
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 1.3e-53 214.5 327 47.1
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 2.9e-53 213.4 389 48.3
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 5.0e-53 212.6 417 47.2
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 6.5e-53 212.2 492 38.6
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 1.4e-52 211.1 368 42.9
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.4e-52 211.1 319 48.0
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 1.4e-52 211.1 316 49.7
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 3.2e-52 209.9 421 41.6
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 3.2e-52 209.9 444 36.3
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.5e-52 209.1 316 47.5
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 7.2e-52 208.8 426 43.4
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 7.2e-52 208.8 296 48.6
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 2.1e-51 207.2 377 44.8
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.7e-51 206.1 439 40.1
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 6.1e-51 205.7 428 42.8
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 6.1e-51 205.7 428 42.8
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 5.2e-50 202.6 305 47.5
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 5.7e-49 199.1 325 47.1
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 9.7e-49 198.4 480 39.6
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.3e-48 198.0 424 38.7
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 2.2e-48 197.2 410 38.0
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 3.7e-48 196.4 375 41.9
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 8.2e-48 195.3 386 43.8
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 1.1e-47 194.9 381 43.3
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 1.1e-47 194.9 377 48.8
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.4e-47 194.5 404 42.3
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 1.8e-47 194.1 377 47.2
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 2.4e-47 193.7 377 48.5
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 2.4e-47 193.7 309 44.0
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 4.1e-47 193.0 341 40.5
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 3.5e-46 189.9 123 72.4
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 4.5e-46 189.5 415 40.2
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 5.9e-46 189.1 231 50.6
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 6.5e-45 185.7 379 49.1
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 1.1e-44 184.9 391 43.5
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 1.5e-44 184.5 296 46.6
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 4.2e-44 183.0 380 45.8
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 5.5e-44 182.6 383 47.0
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 3.6e-43 179.9 382 45.3
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.4e-42 177.9 327 42.5
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 1.4e-42 177.9 298 46.3
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 4.0e-42 176.4 298 46.3
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 2.2e-40 170.6 312 40.7
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 9.1e-39 165.2 109 71.6
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 3.5e-38 163.3 312 38.5
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 2.9e-37 160.2 98 80.6
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.1e-36 158.3 230 50.0
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 2.5e-36 157.1 111 71.2
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 6.1e-35 152.5 96 77.1
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 8.8e-34 148.7 115 67.8
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 8.8e-34 148.7 109 69.7
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 1.5e-33 147.9 241 41.9
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.3e-32 144.8 112 67.0
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 2.2e-32 144.1 108 68.5
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 1.2e-30 138.3 351 39.0
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 1.3e-29 134.8 444 37.4
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 5.0e-29 132.9 301 36.5
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.5e-28 131.3 76 85.5
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 7.2e-28 129.0 335 41.2
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 2.6e-25 120.6 325 33.2
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 5.7e-25 119.4 334 40.1
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 9.8e-25 118.6 179 43.0
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 1.4e-23 114.8 64 81.2
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 1.0e-21 108.6 146 45.9
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 2.3e-21 107.5 409 31.5
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 3.9e-21 106.7 54 92.6
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 8.0e-19 99.0 237 40.5
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 1.0e-18 98.6 376 30.9
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 5.2e-18 96.3 74 66.2
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 7.5e-17 92.4 54 81.5
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 9.8e-17 92.0 54 81.5
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 7.0e-15 85.9 53 75.5
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 3.5e-14 83.6 61 62.3
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 3.2e-07 60.5 84 35.7
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 1.2e-06 58.5 90 37.8


User provided reference genes

Program Settings